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Report for CCDS14276.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14276.1 Public Homo sapiens X CDK16 24 110 108 CCDS HistoryNCBI Gene:5127Re-query CCDS DB by CCDS ID:14276.1Re-query CCDS DB by GeneID:5127See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 14276.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357227.9 ENSP00000349762.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357227.9Link to Ensembl Protein Viewer:ENSP00000349762.4Re-query CCDS DB by Nucleotide ID:ENST00000357227Re-query CCDS DB by Protein ID:ENSP00000349762
Original member Current member EBI ENST00000518022.5 ENSP00000429751.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000518022.5Link to Ensembl Protein Viewer:ENSP00000429751.1Re-query CCDS DB by Nucleotide ID:ENST00000518022Re-query CCDS DB by Protein ID:ENSP00000429751
Original member Current member NCBI NM_006201.5 NP_006192.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006201.5Link to Protein Sequence:NP_006192.1Re-query CCDS DB by Nucleotide ID:NM_006201Re-query CCDS DB by Protein ID:NP_006192Link to BLAST:NP_006192.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006192.1 496 Q00536-1 496 100% 0 0

Chromosomal Locations for CCDS 14276.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 47223558 47223759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47224385 47224518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47224618 47224743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47224834 47224890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47224988 47225102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47225772 47225866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47225965 47226027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47226279 47226402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47226583 47226703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47226812 47226909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47226994 47227099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47227181 47227223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47227379 47227469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47228567 47228644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 47228731 47228768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1491 nt):
ATGGATCGGATGAAGAAGATCAAACGGCAGCTGTCAATGACACTCCGAGGTGGCCGAGGCATAGACAAGA
CCAATGGTGCCCCTGAGCAGATAGGCCTGGATGAGAGTGGTGGTGGTGGCGGCAGTGACCCTGGAGAGGC
CCCCACACGTGCTGCTCCTGGGGAACTTCGTTCTGCACGGGGCCCACTCAGCTCTGCACCAGAGATTGTG
CACGAGGACTTGAAGATGGGGTCTGATGGGGAGAGTGACCAGGCTTCAGCCACGTCCTCGGATGAGGTGC
AGTCTCCAGTGAGAGTGCGTATGCGCAACCATCCCCCACGCAAGATCTCCACTGAGGACATCAACAAGCG
CCTATCACTACCAGCTGACATCCGGCTGCCTGAGGGCTACCTGGAGAAGCTGACCCTCAATAGCCCCATC
TTTGACAAGCCCCTCAGCCGCCGCCTCCGTCGTGTCAGCCTATCTGAGATTGGCTTTGGGAAACTGGAGA
CCTACATTAAGCTGGACAAACTGGGCGAGGGTACCTATGCCACCGTCTACAAAGGCAAAAGCAAGCTCAC
AGACAACCTTGTGGCACTCAAGGAGATCAGACTGGAACATGAAGAGGGGGCACCCTGCACCGCCATCCGG
GAAGTGTCCCTGCTCAAGGACCTCAAACACGCCAACATCGTTACGCTACATGACATTATCCACACGGAGA
AGTCCCTCACCCTTGTCTTTGAGTACCTGGACAAGGACCTGAAGCAGTACCTGGATGACTGTGGGAACAT
CATCAACATGCACAACGTGAAACTGTTCCTGTTCCAGCTGCTCCGTGGCCTGGCCTACTGCCACCGGCAG
AAGGTGCTACACCGAGACCTCAAGCCCCAGAACCTGCTCATCAACGAGAGGGGAGAGCTCAAGCTGGCTG
ACTTTGGCCTGGCCCGAGCCAAGTCAATCCCAACAAAGACATACTCCAATGAGGTGGTGACACTGTGGTA
CCGGCCCCCTGACATCCTGCTTGGGTCCACGGACTACTCCACTCAGATTGACATGTGGGGTGTGGGCTGC
ATCTTCTATGAGATGGCCACAGGCCGTCCCCTCTTTCCGGGCTCCACGGTGGAGGAACAGCTACACTTCA
TCTTCCGTATCTTAGGAACCCCAACTGAGGAGACGTGGCCAGGCATCCTGTCCAACGAGGAGTTCAAGAC
ATACAACTACCCCAAGTACCGAGCCGAGGCCCTTTTGAGCCACGCACCCCGACTTGATAGCGACGGGGCC
GACCTCCTCACCAAGCTGTTGCAGTTTGAGGGTCGAAATCGGATCTCCGCAGAGGATGCCATGAAACATC
CATTCTTCCTCAGTCTGGGGGAGCGGATCCACAAACTTCCTGACACTACTTCCATATTTGCACTAAAGGA
GATTCAGCTACAAAAGGAGGCCAGCCTTCGGTCTTCGTCGATGCCTGACTCAGGCAGGCCAGCTTTCCGC
GTGGTGGACACCGAGTTCTAA

Translation (496 aa):
MDRMKKIKRQLSMTLRGGRGIDKTNGAPEQIGLDESGGGGGSDPGEAPTRAAPGELRSARGPLSSAPEIV
HEDLKMGSDGESDQASATSSDEVQSPVRVRMRNHPPRKISTEDINKRLSLPADIRLPEGYLEKLTLNSPI
FDKPLSRRLRRVSLSEIGFGKLETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR
EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ
KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGC
IFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGA
DLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTTSIFALKEIQLQKEASLRSSSMPDSGRPAFR
VVDTEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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