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Report for CCDS14350.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14350.1 Public Homo sapiens X TSPYL2 24 110 108 CCDS HistoryNCBI Gene:64061Re-query CCDS DB by CCDS ID:14350.1Re-query CCDS DB by GeneID:64061See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14350.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375442.8 ENSP00000364591.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375442.8Link to Ensembl Protein Viewer:ENSP00000364591.4Re-query CCDS DB by Nucleotide ID:ENST00000375442Re-query CCDS DB by Protein ID:ENSP00000364591
Original member Current member NCBI NM_022117.4 NP_071400.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022117.4Link to Protein Sequence:NP_071400.1Re-query CCDS DB by Nucleotide ID:NM_022117Re-query CCDS DB by Protein ID:NP_071400Link to BLAST:NP_071400.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071400.1 693 Q9H2G4 693 100% 0 0

Chromosomal Locations for CCDS 14350.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 53082499 53083305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 53084545 53084622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 53084755 53084866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 53084954 53085099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 53085227 53085321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 53085631 53086310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 53087776 53087939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2082 nt):
ATGGACCGCCCAGATGAGGGGCCTCCGGCCAAGACCCGCCGCCTGAGCAGCTCCGAGTCTCCACAGCGCG
ACCCGCCCCCGCCGCCGCCGCCGCCGCCGCTCCTCCGACTGCCGCTGCCTCCACCCCAGCAGCGCCCGAG
GCTCCAGGAGGAAACGGAGGCGGCACAGGTGCTGGCCGATATGAGGGGGGTGGGACTGGGCCCCGCGCTG
CCCCCGCCGCCTCCCTATGTCATTCTCGAGGAGGGGGGGATCCGCGCATACTTCACGCTCGGTGCTGAGT
GTCCCGGCTGGGATTCTACCATCGAGTCGGGGTATGGGGAGGCGCCCCCGCCCACGGAGAGCCTGGAAGC
ACTCCCCACTCCTGAGGCCTCGGGGGGGAGCCTGGAAATCGATTTTCAGGTTGTACAGTCGAGCAGTTTT
GGTGGAGAGGGGGCCCTAGAAACCTGTAGCGCAGTGGGGTGGGCGCCCCAGAGGTTAGTTGACCCGAAGA
GCAAGGAAGAGGCGATCATCATAGTGGAGGATGAGGATGAGGATGAGCGGGAGAGTATGAGGAGCAGCAG
GAGGCGGCGGCGGCGGCGGAGGAGGAAGCAGAGGAAGGTGAAGAGGGAAAGCAGAGAGAGAAATGCCGAG
AGGATGGAGAGCATCCTGCAGGCACTGGAGGATATTCAGCTGGATCTGGAGGCAGTGAACATCAAGGCAG
GCAAAGCCTTCCTGCGTCTCAAGCGCAAGTTCATCCAGATGCGAAGACCCTTCCTGGAGCGCAGAGACCT
CATCATCCAGCATATCCCAGGCTTCTGGGTCAAAGCATTCCTCAACCACCCCAGAATTTCAATTTTGATC
AACCGACGTGATGAAGACATTTTCCGCTACTTGACCAATCTGCAGGTACAGGATCTCAGACATATCTCCA
TGGGCTACAAAATGAAGCTGTACTTCCAGACTAACCCCTACTTCACAAACATGGTGATTGTCAAGGAGTT
CCAGCGCAACCGCTCAGGCCGGCTGGTGTCTCACTCAACCCCAATCCGCTGGCACCGGGGCCAGGAACCC
CAGGCCCGTCGTCACGGGAACCAGGATGCGAGCCACAGCTTTTTCAGCTGGTTCTCAAACCATAGCCTCC
CAGAGGCTGACAGGATTGCTGAGATTATCAAGAATGATCTGTGGGTTAACCCTCTACGCTACTACCTGAG
AGAAAGGGGCTCCAGGATAAAGAGAAAGAAGCAAGAAATGAAGAAACGTAAAACCAGGGGCAGATGTGAG
GTGGTGATCATGGAAGACGCCCCTGACTATTATGCAGTGGAAGACATTTTCAGCGAGATCTCAGACATTG
ATGAGACAATTCATGACATCAAGATCTCTGACTTCATGGAGACCACCGACTACTTCGAGACCACTGACAA
TGAGATAACTGACATCAATGAGAACATCTGCGACAGCGAGAATCCTGACCACAATGAGGTCCCCAACAAC
GAGACCACTGATAACAACGAGAGTGCTGATGACCACGAAACCACTGACAACAATGAGAGTGCAGATGACA
ACAACGAGAATCCTGAAGACAATAACAAGAACACTGATGACAACGAAGAGAACCCTAACAACAACGAGAA
CACTTACGGCAACAACTTCTTCAAAGGTGGCTTCTGGGGCAGCCATGGCAACAACCAGGACAGCAGCGAC
AGTGACAATGAAGCAGATGAGGCCAGTGATGATGAAGATAATGATGGCAACGAAGGTGACAATGAGGGCA
GTGATGATGATGGCAATGAAGGTGACAATGAAGGCAGCGATGATGACGACAGAGACATTGAGTACTATGA
GAAAGTTATTGAAGACTTTGACAAGGATCAGGCTGACTACGAGGACGTGATAGAGATCATCTCAGACGAA
TCAGTGGAAGAAGAGGGCATTGAGGAAGGCATCCAGCAAGATGAGGACATCTATGAGGAAGGAAACTATG
AGGAGGAAGGAAGTGAAGATGTCTGGGAAGAAGGGGAAGATTCGGACGACTCTGACCTAGAGGATGTGCT
TCAGGTCCCAAACGGTTGGGCCAATCCGGGGAAGAGGGGGAAAACCGGATAA

Translation (693 aa):
MDRPDEGPPAKTRRLSSSESPQRDPPPPPPPPPLLRLPLPPPQQRPRLQEETEAAQVLADMRGVGLGPAL
PPPPPYVILEEGGIRAYFTLGAECPGWDSTIESGYGEAPPPTESLEALPTPEASGGSLEIDFQVVQSSSF
GGEGALETCSAVGWAPQRLVDPKSKEEAIIIVEDEDEDERESMRSSRRRRRRRRRKQRKVKRESRERNAE
RMESILQALEDIQLDLEAVNIKAGKAFLRLKRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRISILI
NRRDEDIFRYLTNLQVQDLRHISMGYKMKLYFQTNPYFTNMVIVKEFQRNRSGRLVSHSTPIRWHRGQEP
QARRHGNQDASHSFFSWFSNHSLPEADRIAEIIKNDLWVNPLRYYLRERGSRIKRKKQEMKKRKTRGRCE
VVIMEDAPDYYAVEDIFSEISDIDETIHDIKISDFMETTDYFETTDNEITDINENICDSENPDHNEVPNN
ETTDNNESADDHETTDNNESADDNNENPEDNNKNTDDNEENPNNNENTYGNNFFKGGFWGSHGNNQDSSD
SDNEADEASDDEDNDGNEGDNEGSDDDGNEGDNEGSDDDDRDIEYYEKVIEDFDKDQADYEDVIEIISDE
SVEEEGIEEGIQQDEDIYEEGNYEEEGSEDVWEEGEDSDDSDLEDVLQVPNGWANPGKRGKTG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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