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Report for CCDS14520.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14520.1 Public Homo sapiens X RNF128 24 110 108 CCDS HistoryNCBI Gene:79589Re-query CCDS DB by CCDS ID:14520.1Re-query CCDS DB by GeneID:79589See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14520.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324342.7 ENSP00000316127.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000324342.7Link to Ensembl Protein Viewer:ENSP00000316127.3Re-query CCDS DB by Nucleotide ID:ENST00000324342Re-query CCDS DB by Protein ID:ENSP00000316127
Original member Current member NCBI NM_024539.3 NP_078815.3 Accepted alive Link to Nucleotide Sequence:NM_024539.3Link to Protein Sequence:NP_078815.3Re-query CCDS DB by Nucleotide ID:NM_024539Re-query CCDS DB by Protein ID:NP_078815Link to BLAST:NP_078815.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078815.3 402 Q8TEB7-2 402 100% 0 0

Chromosomal Locations for CCDS 14520.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 106694003 106694408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106772913 106773160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106785065 106785136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106787918 106788000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106790186 106790282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106791066 106791234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 106795580 106795713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1209 nt):
ATGAACCAGGAGAATAGGTCCAGTTTTTTTTGGCTCCTTGTAATTTTTACCTTTTTACTTAAAATTACAG
CATCTTTTTCAATGAGTGCCTATGTGACTGTGACTTATTACAATGAAACCAGCAACTACACTGCAATAGA
GACATGTGAATGTGGCGTTTATGGATTAGCTTCACCAGTGGCTAATGCTATGGGAGTGGTAGGCATCCCT
AAGAACAATAACTACCAAGCTTGTGACCACAACACTGAGTTTAGTAATACTAAGAAGCCCTGGATTGCGC
TGATAGAAAGAGGTAATTGTACATTTTCAGAAAAAATTCAAACAGCGGGCAGAAGAAATGCTGATGCTGT
TGTGATTTACAATGCTCCAGAGACTGGCAATCAGACGATACAGATGGCAAATTTTGGTGCAGTAGACATT
GTTGCAATCATGATCGGCAATCTGAAAGGCACAAAAATTCTGCAATCTATTCAAAGAGGCATACAAGTGA
CAATGGTCATAGAAGTAGGGAAAAAACATGGCCCTTGGGTGAATCACTATTCAATTTTTTTCGTTTCTGT
GTCCTTTTTTATTATTACGGCGGCAACTGTGGGCTATTTTATCTTTTATTCTGCTCGAAGGCTACGGAAT
GCAAGAGCTCAAAGCAGGAAGCAGAGGCAATTAAAGGCAGATGCTAAAAAAGCTATTGGAAGGCTTCAAC
TACGCACACTGAAACAAGGAGACAAGGAAATTGGCCCTGATGGAGATAGTTGTGCTGTGTGCATTGAATT
GTATAAACCAAATGATTTGGTACGCATCTTAACGTGCAACCATATTTTCCATAAGACATGTGTTGACCCA
TGGCTGTTAGAACACAGGACTTGCCCCATGTGCAAATGTGACATACTCAAAGCTTTGGGAATTGAGGTGG
ATGTTGAAGATGGATCAGTGTCTTTACAAGTCCCTGTATCCAATGAAATATCTAATAGTGCCTCCTCCCA
TGAAGAGGATAATCGCAGCGAGACCGCATCATCTGGATATGCTTCAGTACAGGGAACAGATGAACCGCCT
CTGGAGGAACACGTGCAGTCAACAAATGAAAGTCTACAGCTGGTAAACCATGAAGCAAATTCTGTGGCAG
TGGATGTTATTCCTCATGTTGACAACCCAACCTTTGAAGAAGACGAAACTCCTAATCAAGAGACTGCTGT
TCGAGAAATTAAATCTTAA

Translation (402 aa):
MNQENRSSFFWLLVIFTFLLKITASFSMSAYVTVTYYNETSNYTAIETCECGVYGLASPVANAMGVVGIP
KNNNYQACDHNTEFSNTKKPWIALIERGNCTFSEKIQTAGRRNADAVVIYNAPETGNQTIQMANFGAVDI
VAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSARRLRN
ARAQSRKQRQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDP
WLLEHRTCPMCKCDILKALGIEVDVEDGSVSLQVPVSNEISNSASSHEEDNRSETASSGYASVQGTDEPP
LEEHVQSTNESLQLVNHEANSVAVDVIPHVDNPTFEEDETPNQETAVREIKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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