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Report for CCDS14767.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14767.1 Public Homo sapiens X CLIC2 24 110 108 CCDS HistoryNCBI Gene:1193Re-query CCDS DB by CCDS ID:14767.1Re-query CCDS DB by GeneID:1193See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14767.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369449.7 ENSP00000358460.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369449.7Link to Ensembl Protein Viewer:ENSP00000358460.2Re-query CCDS DB by Nucleotide ID:ENST00000369449Re-query CCDS DB by Protein ID:ENSP00000358460
Original member Current member NCBI NM_001289.6 NP_001280.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001289.6Link to Protein Sequence:NP_001280.3Re-query CCDS DB by Nucleotide ID:NM_001289Re-query CCDS DB by Protein ID:NP_001280Link to BLAST:NP_001280.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001280.3 247 O15247 247 100% 0 0

Chromosomal Locations for CCDS 14767.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 155277903 155278064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 155279149 155279330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 155279962 155280068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 155298785 155298910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 155299036 155299145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 155334371 155334427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGTCAGGCCTGCGGCCCGGCACTCAAGTGGACCCTGAGATTGAGCTTTTTGTAAAGGCTGGAAGTGATG
GAGAGAGTATTGGAAACTGTCCCTTTTGCCAACGCCTTTTCATGATCCTCTGGCTTAAAGGAGTTAAATT
TAATGTGACAACTGTTGACATGACCAGAAAGCCTGAAGAACTAAAGGACTTAGCCCCAGGTACCAATCCT
CCGTTCCTGGTGTATAACAAGGAGTTGAAAACAGACTTCATTAAAATTGAGGAGTTTTTAGAACAAACCC
TGGCTCCTCCAAGGTACCCTCACCTGAGTCCCAAGTACAAGGAGTCTTTTGATGTGGGCTGTAACCTCTT
TGCCAAGTTTTCTGCATACATTAAGAATACACAAAAGGAGGCAAATAAGAATTTTGAAAAATCTCTGCTC
AAAGAATTCAAGCGTCTGGATGACTACTTAAACACCCCACTTCTGGATGAAATTGATCCAGACAGTGCTG
AGGAACCCCCAGTTTCCAGAAGACTATTCTTGGATGGGGACCAGCTAACACTGGCTGATTGTAGCTTGTT
ACCCAAGCTGAACATTATTAAAGTTGCTGCCAAGAAATATCGTGACTTTGACATTCCAGCAGAATTCTCA
GGAGTCTGGCGTTATCTCCACAATGCCTATGCCCGTGAAGAATTTACCCACACGTGTCCTGAAGACAAAG
AAATTGAAAATACTTACGCAAATGTGGCTAAACAGAAGAGTTAG

Translation (247 aa):
MSGLRPGTQVDPEIELFVKAGSDGESIGNCPFCQRLFMILWLKGVKFNVTTVDMTRKPEELKDLAPGTNP
PFLVYNKELKTDFIKIEEFLEQTLAPPRYPHLSPKYKESFDVGCNLFAKFSAYIKNTQKEANKNFEKSLL
KEFKRLDDYLNTPLLDEIDPDSAEEPPVSRRLFLDGDQLTLADCSLLPKLNIIKVAAKKYRDFDIPAEFS
GVWRYLHNAYAREEFTHTCPEDKEIENTYANVAKQKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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