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Report for CCDS14881.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14881.1 Public Mus musculus 1 Cnnm3 23 108 98 CCDS HistoryNCBI Gene:94218Re-query CCDS DB by CCDS ID:14881.1Re-query CCDS DB by GeneID:94218See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14881.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000097776.3 ENSMUSP00000095383.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000097776.3Link to Ensembl Protein Viewer:ENSMUSP00000095383.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000097776Re-query CCDS DB by Protein ID:ENSMUSP00000095383
Original member Current member NCBI NM_001039551.2 NP_001034640.1 Accepted alive Link to Nucleotide Sequence:NM_001039551.2Link to Protein Sequence:NP_001034640.1Re-query CCDS DB by Nucleotide ID:NM_001039551Re-query CCDS DB by Protein ID:NP_001034640Link to BLAST:NP_001034640.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034640.1 708 Q32NY4-2 708 100% 0 0

Chromosomal Locations for CCDS 14881.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 36511911 36513153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36518952 36519095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36520078 36520227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36520519 36520688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36520819 36520915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36521205 36521338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36521701 36521839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36524034 36524083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2127 nt):
ATGGCGGCGGCTGCTGCGGCTGTGGTGGGTTGGTTGGGCTGGGTGCTTGCCGCGTTCTGTCTGGGCAGCA
CCGCAGGGGAGGCGGCGCCGGCGCCGGGCGCGGGACTGCTGAACTTCTGCACGGAAGAGGACAGCGCACC
GGGCGCGGGCTCCCTGCGCGGAAGGGCAGCGCCAGAGGCCACTTTGTGCTTGCGACTCTTCTGCTCCGGC
TTGGCCAACAGCTCCTGGACCTGGGTAGCCGCCGAGGGCGCAGGCTGCCCGGAGGGCGGACGGGCCACGG
AGCCCGAGGAGGCGGCCGCCCCGACGGGCGAGTGGCGCGCGCTGCTGCGCCTGCGCGCCGAGGCCGGCCA
CCCGCGCTCCGCGCTGCTGGCGGTGCGCGTGGAGCCGGGTGGTGGGGCCGCGGAGGAGGCGGCGCCGCCC
TGGGCGCTGGGGCTGGGGGCGGCCGGGCTGCTGGCCCTGGCGGCGGTGGCGCGCGGCCTGCAGCTGAGCG
CGCTGGCGCTGGCGCCGGCCGAGGTGCAGGTGCTGCGCGAGAGCGGCTCGGAGGCGGAGCGCGCGGCGGC
GCGGCGCCTGGAACCCGCGCGGCGCTGGGCCGGCTGCGCCCTGGGCGCGCTGCTGCTTCTGGCCAGCCTG
GCGCAGGCGGCACTGGCCGTGCTGCTGTACGGGGCGGCGGGCCAGCGCGCCGTGCCCGCCGTGCTGGGTT
GCGCGGGGCTGGTGTTCCTGGTGGGTGAGGTGCTGCCGGCCGCCGTGAGCGGACGCTGGGCGCTGGCGCT
GGCGCCGCGCGCGTTGGGCCTCAGCCGCCTGGCGGTGCTGCTCACCTTGCCCGTGGCGCTGCCGGTCGGG
CAGCTGCTGGAGCTGGCAGCGCGGCCGGGGCGTCTGCGGGAGCGCGTGCTGGAGCTGGCGCGCGGCGGCG
GCGACCCCTACAGCGACCTCAGCAAGGGAGTGCTGCGCTCCCGGACCGTGGAGGACGTGCTCACGCCGCT
CGAAGACTGCTTTATGCTGGACTCCGGCACTGTCCTAGACTTCAGCGTCCTCGCCAGCATCATGCAGAGC
GGCCACACGCGCATCCCAGTGTACGAGGAGGAGCGCTCCAACATCGTGGACATGCTCTACCTCAAAGACT
TGGCTATCGTTGAGCCCGAGGACTGCACACCGCTCAGCACCATCACCCGCTTCTACAACCATCCACTCCA
CTTTGTCTTCAACGATACCAAACTGGACGCTGTCCTGGAGGAGTTCAAGCGAGGCAAGTCCCACCTGGCC
ATTGTGCAGAAGGTGAACAATGAGGGCGAGGGCGACCCCTTCTACGAGGTGCTGGGCCTGGTCACCCTGG
AGGACGTCATCGAGGAGATCATCAAGTCTGAGATCTTGGATGAGTCTGAAGACTACTCAGACACAAAGGT
GAGGAAGAAGACCGTCGCCCTGGGAGCTCCTCTCAAGCGAAAGGAGGAATTCTCCTTATTCAAGGTGTCT
GATGATGAATATAAAGTAAAAATCTCGCCTCAGCTGCTCCTGGCCACCCAGCGCTTCCTTTCCCGAGAGG
TGGATGTGTTCAGCCCATTGCGAGTCTCTGAGAAAGTCTTGCTGCACCTGCTGAAGCATCCCAGTGTCAA
CCAGGAGGTGACGTTTGACGAGAGCAACCGCCTGGCCGCACACCATTATCTGTACCAGCGCAGCCAGCCA
GTAGATTACTTCATTCTCATTCTGCAGGGCAGAGTCGAGGTCGAAATTGGGAAAGAGGGCCTGAAGTTCG
AGAACGGGGCCTTCACGTACTATGGAGTGTCCGCCCTGACAGCCCCATCCTCAGCTCACCAGTCCCCAGT
GTCTTCACGCCAGCTCATCCGCCATGACGTGCAGCCTGAACCAGCCGATGGTACCCGCTCCTGCACATAC
TGTCCTGACTACACTGTGAGGGCCCTTTCCGACCTGCAGCTCATTAAGGTCACACGGCTGCAGTACCTTA
ATGCACTCCTGGCTACCCGAGCCCAAAGCTTGCCTCCATCCCCAGAGAACGCTGAGCTCCAGGCTATCCC
AGGCAGCCAGACCAGGCTCCTTGGTGACAAGTCCAGAGAGACAGCAGCCTTCCCAGTCCACCTTTCCCTC
TTTGGCACACTTGGAAACTGCAGTTGA

Translation (708 aa):
MAAAAAAVVGWLGWVLAAFCLGSTAGEAAPAPGAGLLNFCTEEDSAPGAGSLRGRAAPEATLCLRLFCSG
LANSSWTWVAAEGAGCPEGGRATEPEEAAAPTGEWRALLRLRAEAGHPRSALLAVRVEPGGGAAEEAAPP
WALGLGAAGLLALAAVARGLQLSALALAPAEVQVLRESGSEAERAAARRLEPARRWAGCALGALLLLASL
AQAALAVLLYGAAGQRAVPAVLGCAGLVFLVGEVLPAAVSGRWALALAPRALGLSRLAVLLTLPVALPVG
QLLELAARPGRLRERVLELARGGGDPYSDLSKGVLRSRTVEDVLTPLEDCFMLDSGTVLDFSVLASIMQS
GHTRIPVYEEERSNIVDMLYLKDLAIVEPEDCTPLSTITRFYNHPLHFVFNDTKLDAVLEEFKRGKSHLA
IVQKVNNEGEGDPFYEVLGLVTLEDVIEEIIKSEILDESEDYSDTKVRKKTVALGAPLKRKEEFSLFKVS
DDEYKVKISPQLLLATQRFLSREVDVFSPLRVSEKVLLHLLKHPSVNQEVTFDESNRLAAHHYLYQRSQP
VDYFILILQGRVEVEIGKEGLKFENGAFTYYGVSALTAPSSAHQSPVSSRQLIRHDVQPEPADGTRSCTY
CPDYTVRALSDLQLIKVTRLQYLNALLATRAQSLPPSPENAELQAIPGSQTRLLGDKSRETAAFPVHLSL
FGTLGNCS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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