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Report for CCDS15701.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
15701.1 |
Public |
Mus musculus |
2 |
Slc39a12 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana)
Attributes |
CDS uses downstream AUG |
Sequence IDs included in CCDS 15701.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000082290.7 |
ENSMUSP00000080911.6 |
Accepted |
alive |
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NCBI |
NM_001012305.2 |
NP_001012305.1 |
Updated |
not alive |
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NCBI |
NM_001012305.3 |
NP_001012305.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001012305.1 |
689 |
Q5FWH7-1 |
689 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 15701.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2070 nt): ATGTGCTTCTGGACCAATCTTTCAGTGTGGATGATCCTACTGTCCCACTCCCTCAGCCTCGTTTCCTCTA CTGAGACCGGCAAAACCCTCACTCAGAATAACAGCAGAGCTGGGAGCCAAGGCCTGCTAGAAGTTCTGAG GGTCCTCTCTGCTGGTGACCACTGGTCCCTCAACCATCCACAAAGCCTCATCAAAATTCTGTTGGAGAGG ACTGGGTGTCCACAGAGAACAGATTGGACACAAGGAGACTGCAAGCTGTGTTTGGAAGCAGATGCACTGT TACTCACAGCTGGGGGAAATTTGGAGGATGAGCTAAGAGAGGAGGTAGTCCAGAGAGTTTCTCTTCTTCT CCTCTACTACATAATTCATCAGGAAGAGATCTGTTCTTCCAAGCTCAACATGAGCAACAGAGAATATGAG TTTTACCTGCACAGCCTACTCGGCCTTAGGCAGGATGAAGACTCCTATTTCCTTTCAGAGAAGGAGACTG ATGACATCTTGGCTTTCACCAGGAAGTACTTTGGCACTTCCAGTAGCCAGTGTATGGAAACTAAGATTCT GCAGAGGGAATCTGGCATTCAGGGCAGCAATGGTGCTGATGAAAAGACACTTCCTCAGCTGGCAGCAACC ATCATCGCTCTGTCACTCCAAGGAGTTTGTCTGGGAAGAAAAGCCTTGCCTTCTCCAGATGATTTTACAG AGTATATTTTCAGTTTCCTGAATAGTACCAATACCCTCCACCTATCTGAAATAGAGCAACTTCTGAACAT GCTCACGACCAGAAGGACCTGTGCTAAAGAGGATAAATACCTCCATCAATACCAAAGGAAACAAAACACA GAGGAACACAGTTTGAGAGACCCCAAGACATCTACAGCAATGGACAAAGAGTCTGATGATCATTCTCCTT CCTGGGATCAGGCTTGCTTCTCTGCTAGGCAGTTGGTGGAGATATTTCTACAGAATCATAGCAGTCTGTC CATTTCTAAGGAGGACTTTAAGCAGCTAAGTCCAGGGATCATCCAGCAACTTCTCAGCTGCTCTTGTCAG ATGCCCAAGGACCAGCAAGCAAAGCCCCCACCCACCACTCTGGAGAAATATGGCTACAGTACAGTGGCAG TGACACTCCTAACCTTGGGCTCCATGCTTGGGACAGCGCTGGTCCTTTTCCACAGCTGTGAGGAGAACTA CAGTCTTATTTTACAGCTGTTCGTGGGTTTGGCTGTGGGGACGCTCTCTGGGGATGCCCTGCTCCATCTC ATACCTCAGGTTCTTGGTTTACATAAGCAGGAAGCAGAGTTTGGGCATTTCCATGAAAGCCAAAGTCCTA TTTGGAAGCTGTTGGGACTACTTGGAGGCATCCATGGATTTTTCTTGATAGAAAAATGTTTTATCCTTCT TGTATCACCAAATACCAAGGGTCTGCCATTAGTTAATGAACATGTGGGACATACACACCATCTTGGACTC AATCCAGAATTAAATGACCAGTCAAGTGGAGGCAAGTCTATCTCAACCATCCAACTGAAAGGCCCAGAAG ATTCACAGACAACTGTGCTACCCATAGGCAATGTGCCAGCCTCCAACAGAAATGGCAAAACCATCAGCTT ATTGGCCATTATGATCCTGGTTGGAGATAGCCTGCACAATTTTGCAGATGGCCTAGTAATAGGCACAGCC TTCTCCTCTTCATTGGAGTCAGGAGTGACCACAACAATTGCTATCTTGTGTCATGAAATTCCACATGAAA TGGGAGACTTTGCAGTGCTCTTAAGCTCAGGACTCTCTGTCAGGACTGCCATCCTGATGAATTTTCTAAG TGCCCTGACGGCCTTCGCAGGACTGTACATTGGTCTCTCAGTATCTGCTGACCCACGTGTCCAAGACTGG ATTTTAACAGTGACTGCTGGGATGTTCTTATATTTATCTTTGGTGGGGATGCTTCCTGAAATGACTCATG TTCAGACACAACGACCCTGGATGACGTTTCTCCTGCAGAATGTCGGATTGGTCCTTGGCTGGTTTTCTCT TTTGCTCTTAGCTGTATATGAACAGAATATTAAAATATAA
Translation (689 aa): MCFWTNLSVWMILLSHSLSLVSSTETGKTLTQNNSRAGSQGLLEVLRVLSAGDHWSLNHPQSLIKILLER TGCPQRTDWTQGDCKLCLEADALLLTAGGNLEDELREEVVQRVSLLLLYYIIHQEEICSSKLNMSNREYE FYLHSLLGLRQDEDSYFLSEKETDDILAFTRKYFGTSSSQCMETKILQRESGIQGSNGADEKTLPQLAAT IIALSLQGVCLGRKALPSPDDFTEYIFSFLNSTNTLHLSEIEQLLNMLTTRRTCAKEDKYLHQYQRKQNT EEHSLRDPKTSTAMDKESDDHSPSWDQACFSARQLVEIFLQNHSSLSISKEDFKQLSPGIIQQLLSCSCQ MPKDQQAKPPPTTLEKYGYSTVAVTLLTLGSMLGTALVLFHSCEENYSLILQLFVGLAVGTLSGDALLHL IPQVLGLHKQEAEFGHFHESQSPIWKLLGLLGGIHGFFLIEKCFILLVSPNTKGLPLVNEHVGHTHHLGL NPELNDQSSGGKSISTIQLKGPEDSQTTVLPIGNVPASNRNGKTISLLAIMILVGDSLHNFADGLVIGTA FSSSLESGVTTTIAILCHEIPHEMGDFAVLLSSGLSVRTAILMNFLSALTAFAGLYIGLSVSADPRVQDW ILTVTAGMFLYLSLVGMLPEMTHVQTQRPWMTFLLQNVGLVLGWFSLLLLAVYEQNIKI
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