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Report for CCDS1584.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1584.1 Public Homo sapiens 1 COG2 24 110 108 CCDS HistoryNCBI Gene:22796Re-query CCDS DB by CCDS ID:1584.1Re-query CCDS DB by GeneID:22796See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1584.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366669.9 ENSP00000355629.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366669.9Link to Ensembl Protein Viewer:ENSP00000355629.4Re-query CCDS DB by Nucleotide ID:ENST00000366669Re-query CCDS DB by Protein ID:ENSP00000355629
Original member Current member NCBI NM_007357.3 NP_031383.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007357.3Link to Protein Sequence:NP_031383.1Re-query CCDS DB by Nucleotide ID:NM_007357Re-query CCDS DB by Protein ID:NP_031383Link to BLAST:NP_031383.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031383.1 738 Q14746-1 738 100% 0 0

Chromosomal Locations for CCDS 1584.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 230642607 230642678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230659464 230659625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230660758 230660823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230663141 230663221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230664484 230664587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230668676 230668784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230669356 230669535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230671516 230671640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230674998 230675124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230678913 230679052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230683574 230683635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230685085 230685236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230686935 230687132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230688071 230688143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230688420 230688562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230690014 230690153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230691384 230691564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 230693292 230693393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2217 nt):
ATGGAGAAAAGTAGGATGAACCTGCCCAAGGGGCCGGACACGCTCTGCTTCGACAAGGACGAGTTCATGA
AGGAAGATTTCGATGTCGATCATTTTGTGTCTGACTGTAGGAAGCGGGTCCAGCTGGAAGAACTGAGAGA
TGACCTGGAGCTCTACTATAAACTTCTTAAAACAGCCATGGTCGAACTCATCAACAAGGATTATGCAGAT
TTTGTCAATCTTTCAACAAACTTGGTTGGCATGGACAAAGCCCTCAACCAGCTTTCTGTGCCTTTGGGAC
AATTACGAGAAGAGGTTCTGAGCCTTAGATCGTCTGTCAGTGAAGGAATTCGGGCAGTTGATGAACGAAT
GTCTAAACAAGAGGACATTAGGAAAAAAAAGATGTGTGTATTGAGGCTTATACAAGTTATTCGGTCAGTT
GAGAAAATTGAAAAAATCTTAAACTCTCAAAGTTCTAAAGAAACCTCTGCACTAGAAGCAAGCAGCCCCC
TTTTGACTGGACAAATTTTGGAGAGAATTGCCACAGAATTTAATCAGTTACAGTTTCATGCTGTTCAAAG
CAAAGGCATGCCTCTTTTGGACAAAGTAAGACCGCGTATAGCTGGCATTACAGCCATGTTACAGCAGTCA
CTGGAAGGTCTCCTATTAGAAGGCCTTCAGACGTCTGACGTCGATATAATACGGCACTGCTTGCGGACTT
ACGCCACGATTGACAAGACACGGGACGCGGAGGCCTTAGTTGGCCAAGTACTAGTGAAACCATACATAGA
CGAGGTGATTATAGAGCAGTTTGTTGAATCTCATCCCAATGGCCTTCAGGTCATGTATAATAAACTCCTG
GAGTTTGTTCCTCACCATTGCCGCCTTCTTCGAGAAGTCACAGGAGGTGCCATCTCCAGTGAAAAAGGCA
ATACTGTTCCTGGATATGACTTTTTGGTGAATTCTGTTTGGCCACAAATAGTACAAGGATTAGAAGAAAA
GTTACCCTCGCTTTTTAATCCTGGGAATCCCGATGCATTTCATGAGAAATATACCATAAGTATGGATTTT
GTCAGAAGATTGGAACGGCAGTGTGGATCACAGGCTAGTGTAAAGAGATTAAGAGCCCATCCTGCCTATC
ACAGCTTCAATAAGAAGTGGAACTTGCCTGTTTATTTTCAAATAAGATTTAGAGAAATAGCGGGATCCTT
AGAAGCAGCACTTACAGATGTCCTGGAAGATGCCCCAGCTGAAAGTCCGTATTGCCTTTTGGCTTCTCAT
AGAACTTGGAGCAGCCTTAGGAGGTGTTGGTCAGATGAGATGTTCTTGCCATTACTGGTGCATCGCCTGT
GGAGACTCACTCTGCAGATTTTGGCACGATACTCTGTGTTTGTCAATGAGCTTTCACTCAGGCCCATTTC
TAATGAAAGTCCCAAGGAGATCAAGAAACCTTTGGTAACTGGTAGCAAAGAACCTTCCATCACCCAAGGA
AACACTGAAGACCAAGGAAGTGGTCCTTCGGAAACAAAGCCTGTGGTTTCCATTTCCCGCACTCAGCTCG
TGTATGTGGTTGCAGACCTGGACAAGCTTCAGGAGCAGCTTCCAGAACTCTTGGAAATAATCAAGCCAAA
ACTTGAAATGATTGGCTTTAAGAATTTTTCTTCTATCTCAGCAGCCCTGGAGGACTCCCAGAGCTCTTTT
TCAGCCTGTGTGCCCTCCTTGAGTAGCAAGATCATCCAGGATTTAAGTGACTCTTGCTTCGGTTTCCTAA
AAAGCGCCCTGGAGGTTCCCAGGCTTTACCGAAGAACCAATAAGGAGGTCCCAACCACAGCTTCCTCCTA
TGTGGACAGTGCTCTGAAGCCCTTATTCCAGCTTCAGAGCGGACACAAGGATAAGCTCAAACAAGCAATA
ATTCAGCAGTGGCTAGAAGGCACTCTCAGTGAAAGCACTCATAAGTACTATGAAACCGTGTCAGATGTAT
TAAACTCTGTGAAGAAGATGGAAGAGAGCCTGAAAAGGCTGAAACAAGCCAGAAAAACCACTCCCGCCAA
CCCCGTCGGTCCCAGTGGTGGCATGAGCGACGACGACAAAATCAGGCTGCAGTTGGCCCTAGATGTTGAG
TACTTGGGAGAGCAGATACAAAAGTTGGGACTACAAGCAAGTGACATAAAAAGCTTCTCAGCTCTCGCAG
AGCTTGTTGCTGCTGCCAAGGACCAGGCAACAGCAGAGCAGCCTTAA

Translation (738 aa):
MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYAD
FVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSV
EKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQS
LEGLLLEGLQTSDVDIIRHCLRTYATIDKTRDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLL
EFVPHHCRLLREVTGGAISSEKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDF
VRRLERQCGSQASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH
RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVTGSKEPSITQG
NTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQLPELLEIIKPKLEMIGFKNFSSISAALEDSQSSF
SACVPSLSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEVPTTASSYVDSALKPLFQLQSGHKDKLKQAI
IQQWLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQARKTTPANPVGPSGGMSDDDKIRLQLALDVE
YLGEQIQKLGLQASDIKSFSALAELVAAAKDQATAEQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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