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Report for CCDS1705.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1705.1 Public Homo sapiens 2 WDCP 24 110 108 CCDS HistoryNCBI Gene:80304Re-query CCDS DB by CCDS ID:1705.1Re-query CCDS DB by GeneID:80304See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1705.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295148.9 ENSP00000295148.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295148.9Link to Ensembl Protein Viewer:ENSP00000295148.4Re-query CCDS DB by Nucleotide ID:ENST00000295148Re-query CCDS DB by Protein ID:ENSP00000295148
Original member Current member NCBI NM_025203.3 NP_079479.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025203.3Link to Protein Sequence:NP_079479.1Re-query CCDS DB by Nucleotide ID:NM_025203Re-query CCDS DB by Protein ID:NP_079479Link to BLAST:NP_079479.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079479.1 721 Q9H6R7-1 721 100% 0 0

Chromosomal Locations for CCDS 1705.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 24030933 24031162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24032829 24032946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 24037677 24039494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2166 nt):
ATGGAGTTGGGAAAAGGAAAACTACTCAGGACTGGACTGAATGCGTTGCATCAAGCAGTGCATCCGATCC
ATGGCCTTGCCTGGACCGATGGGAATCAAGTTGTCCTAACTGATTTGCGGCTTCACAGTGGAGAGGTCAA
GTTTGGGGACTCCAAAGTCATTGGACAGTTTGAATGTGTCTGTGGGTTGTCCTGGGCCCCACCTGTTGCA
GATGATACACCTGTTCTACTCGCTGTCCAGCATGAGAAGCATGTCACTGTGTGGCAGCTGTGTCCCAGCC
CTATGGAGTCAAGCAAATGGCTGACGTCTCAGACTTGTGAGATTAGAGGATCACTACCTATCCTTCCCCA
GGGCTGTGTGTGGCACCCAAAATGTGCTATTCTGACTGTGTTGACTGCTCAGGATGTCTCCATTTTCCCT
AATGTTCACTCTGATGATTCCCAGGTAAAGGCAGACATCAACACCCAGGGCCGCATTCACTGTGCATGTT
GGACCCAGGATGGCCTGAGGCTGGTGGTGGCAGTAGGCAGCAGCCTGCATTCTTATATTTGGGACAGCGC
TCAGAAGACTCTTCACAGGTGCTCCTCCTGCCTGGTGTTTGATGTGGACAGCCACGTCTGCTCCATCACA
GCAACTGTGGACTCACAGGTTGCTATAGCTACTGAGCTTCCATTGGATAAGATCTGTGGCTTAAATGCAT
CTGAAACCTTTAATATCCCACCTAACAGTAAAGACATGACTCCGTATGCTTTACCAGTTATTGGTGAAGT
ACGCTCTATGGATAAAGAGGCAACTGATTCTGAAACAAATTCTGAAGTATCAGTTTCTTCTTCCTATTTA
GAACCTCTGGATCTAACTCACATACATTTCAATCAACATAAGTCTGAGGGTAATTCTCTTATTTGTCTAA
GAAAAAAGGACTACTTGACAGGAACTGGCCAAGATTCTTCACATTTGGTCCTTGTGACCTTTAAGAAGGC
AGTTACCATGACGAGAAAAGTCACTATTCCAGGCATTCTGGTTCCTGATCTGATAGCATTTAATCTTAAA
GCCCACGTAGTGGCAGTGGCTTCCAACACTTGTAATATAATTTTGATCTACTCTGTCATTCCATCTTCAG
TCCCAAACATCCAGCAAATTCGATTAGAGAACACTGAAAGACCAAAAGGGATATGTTTCTTGACAGACCA
ACTATTACTAATTTTGGTAGGAAAACAAAAACTCACTGATACAACATTTCTTCCTTCTTCAAAGTCTGAT
CAGTATGCCATTAGCTTGATTGTTAGAGAAATAATGTTGGAAGAAGAACCTTCAATAACATCAGGTGAAA
GCCAGACTACCTACTCTACTTTCAGTGCTCCGTTAAATAAAGCAAATAGAAAAAAGTTAATTGAAAGTCT
TTCCCCAGATTTTTGTCACCAAAACAAAGGGCTGTTGCTGACAGTTAATACCAGTAGTCAGAATGGAAGG
CCTGGAAGAACACTTATTAAAGAAATCCAGAGTCCTCTGTCTAGTATCTGTGATGGCTCCATAGCTCTAG
ATGCTGAGCCTGTTACCCAGCCAGCATCGCTGCCCAGACACAGCAGCACACCAGACCACACCAGCACACT
GGAGCCTCCTCGTTTGCCTCAAAGAAAGAACTTACAAAGTGAAAAGGAAACTTATCAGCTGTCTAAGGAA
GTGGAAATTTTATCTAGGAACCTGGTTGAAATGCAACGGTGTCTTTCTGAACTTACAAACCGTCTGCATA
ATGGGAAGAAATCCTCTTCAGTGTATCCACTCTCTCAAGATCTTCCTTATGTTCACATCATTTACCAGAA
ACCTTATTATCTAGGTCCTGTTGTTGAAAAAAGAGCGGTGCTTCTCTGTGATGGTAAACTAAGGCTCAGT
ACAGTTCAGCAGACTTTTGGCCTTTCTCTCATTGAAATGCTACATGATTCCCACTGGATTCTTCTCTCTG
CTGACAGTGAGGGCTTTATCCCGTTAACCTTCACAGCCACACAGGAAATAATCATAAGAGATGGCAGCCT
GTCCAGGTCAGATGTCTTCAGAGACTCTTTTTCTCACAGTCCAGGTGCTGTTTCTTCTCTTAAAGTCTTT
ACAGGCCTTGCTGCCCCCAGTTTAGATACCACTGGCTGTTGTAACCATGTAGATGGCATGGCTTGA

Translation (721 aa):
MELGKGKLLRTGLNALHQAVHPIHGLAWTDGNQVVLTDLRLHSGEVKFGDSKVIGQFECVCGLSWAPPVA
DDTPVLLAVQHEKHVTVWQLCPSPMESSKWLTSQTCEIRGSLPILPQGCVWHPKCAILTVLTAQDVSIFP
NVHSDDSQVKADINTQGRIHCACWTQDGLRLVVAVGSSLHSYIWDSAQKTLHRCSSCLVFDVDSHVCSIT
ATVDSQVAIATELPLDKICGLNASETFNIPPNSKDMTPYALPVIGEVRSMDKEATDSETNSEVSVSSSYL
EPLDLTHIHFNQHKSEGNSLICLRKKDYLTGTGQDSSHLVLVTFKKAVTMTRKVTIPGILVPDLIAFNLK
AHVVAVASNTCNIILIYSVIPSSVPNIQQIRLENTERPKGICFLTDQLLLILVGKQKLTDTTFLPSSKSD
QYAISLIVREIMLEEEPSITSGESQTTYSTFSAPLNKANRKKLIESLSPDFCHQNKGLLLTVNTSSQNGR
PGRTLIKEIQSPLSSICDGSIALDAEPVTQPASLPRHSSTPDHTSTLEPPRLPQRKNLQSEKETYQLSKE
VEILSRNLVEMQRCLSELTNRLHNGKKSSSVYPLSQDLPYVHIIYQKPYYLGPVVEKRAVLLCDGKLRLS
TVQQTFGLSLIEMLHDSHWILLSADSEGFIPLTFTATQEIIIRDGSLSRSDVFRDSFSHSPGAVSSLKVF
TGLAAPSLDTTGCCNHVDGMA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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