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Report for CCDS1882.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1882.1 Public Homo sapiens 2 ETAA1 24 110 108 CCDS HistoryNCBI Gene:54465Re-query CCDS DB by CCDS ID:1882.1Re-query CCDS DB by GeneID:54465See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1882.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272342.6 ENSP00000272342.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000272342.6Link to Ensembl Protein Viewer:ENSP00000272342.5Re-query CCDS DB by Nucleotide ID:ENST00000272342Re-query CCDS DB by Protein ID:ENSP00000272342
Original member Current member NCBI NM_019002.4 NP_061875.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019002.4Link to Protein Sequence:NP_061875.2Re-query CCDS DB by Nucleotide ID:NM_019002Re-query CCDS DB by Protein ID:NP_061875Link to BLAST:NP_061875.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061875.2 926 Q9NY74 926 100% 0 0

Chromosomal Locations for CCDS 1882.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 67397449 67397671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 67399169 67399297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 67399550 67399626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 67402862 67402974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 67403225 67405335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 67409911 67410038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2781 nt):
ATGAGTCGGCGAAGGAAACATGATGACAGCCCTAGCCCGAAGAAAACGCCGCACAAAACAGTGGCGGCGG
AGGAATGCGGCTCGGTGGTCGAGCCAGGGAGGAGGCGGCTGAGATCGGCCCGCGGTTCGTGGCCCTGCGG
GGCTAGAGAGGGGCCTCCCGGGCCAGTGCGGCAGCGAGAGCAGCCTCCGACCGCCGCCCTGTGCAGTAAA
AGTAACCCCGAGGAAAGGTATGAAACACCAAAGAGAGCGCTGAAAATGGACTCACTGTCATCTTCCTTCA
GTTCTCCTAATGATCCAGATGGACAGAATGATATCTTTTGGGATCAGAATTCTCCATTGACAAAGCAGTT
AGGTAAAGGAAGAAAAAAACAGATTTACACCACAGATAGTGATGAGATTTCACATATTGTTAATCGTATT
GCTCCTCAGGATGAAAAACCAACAACAAATTCTATGCTGGACATGTGGATTGGTGAAACTGCTATTCCTT
GTACTCCCAGTGTAGCAAAAGGAAAATCAAGAGCAAAAATCAGCTGCACAAAGTTAAAAACACAAAGTCA
AGAAGAAGAACTTATGAAACTGGCTAAACAATTTGATAAAAATATGGAAGAGCTAGATGTGATTCAAGAG
CAAAACAAGAGGAATTATGATTTTACCCAGATGATTTCAGAAACAGAGATTTTAAGTAATTATAAAGATA
ATATACAGATGTGGTCATTACATAATATAGTTCCCGAAATAGATAATGCTACAAAAAAGCCAATCAAAGG
AAACACCAAGATATCTGTGGCAAATAATCAAAATAGCAGTCAGAAGCCATTTGACCAAATTGCTGAAGCA
GCCTTTAATGCTATTTTTGATGGTTCTACTCAGAAATGTAGCGGACAGTTAAGCCAAGAACTGCCAGAGG
CTTTTTGGAGCACCAGTAATACTACCTTTGTAAAGACAAATGCTTTGAAAGAGGAGAAAATCATTACTAA
TGAAACTCTGGTCATTGAAAAACTGTCAAATAAAACCCCACGATCACTTTCTTCTCAAGTAGATACACCC
ATAATGACAAAATCATGTGTGACTTCCTGTACTAAGGAGCCAGAAACTTCTAATAAGTACATTGATGCAT
TTACTACAAGTGATTTTGAGGATGATTGGGAAAACTTACTAGGTAGTGAACCTTTTGCTATGCAAAATAT
CGACATGCCTGAACTCTTTCCTTCTAAAACAGCCCATGTTACTGATCAAAAGGAAATTTGTACCTTTAAT
AGTAAAACTGTTAAAAATACGTCAAGAGCAAATACAAGTCCAGATGCCAGGTTAGGAGATTCAAAAGTAT
TACAAGATCTTTCTTCAAAGACATATGACAGAGAATTAATAGATGCAGAATATAGATTTTCACCAAATTC
AAATAAATCAAACAAATTATCCACTGGAAATAAAATGAAATTTGAGAACTCTTCCAATAAAATTGTTATT
CAAGACGAAATTCAAAATTGTATAGTTACATCTAATCTGACAAAAATAAAGGAAGATATTCTTACTAACT
CTACTGAAGCTTCTGAAAGGAAGTCAGCTTTGAACACAAGGTATTCTAATGAACAGAAAAATAAGTGCAT
TTTAAATCAGTCTATTAAAGCCCCTGTTAATACTGATCTTTTTGGCTCTGCAAATCTAGGCAGTAAAACC
AGTGTTAGTAACCCAAATCAGACTAGTGCATCAAAAGTAGGTTCTTTCTTTGATGATTGGAATGATCCCT
CATTTGCCAATGAAATTATTAAAGCATGTCATCAATTAGATAATACCTGGGAAGCAGATGATGTAGATGA
TGATTTGTTGTACCAAGCATGTGATGATATTGAAAGACTAACTCAGCAACAAGACATTAGAAAGGACAGT
AAGACATCAGAAAGTATATGTGAGATCAATAATAATTCCGAACATGGAGCCAAACTAACTCAGCAACAAG
ACATTAGAAAGGACAGTAAGACATCAGAAAGTATATGTGAGATCAATAATAATTCCGAACATGGAGCCAA
AAACATGTTTGCTATATCTAAACAAGGAAGTAATTTGGTACAATCAAAGCATTTGAATCCAGGCAGCATT
TCAGTGCAGACATCTTTGACAAATAGCTCACAAATAGATAAGCCAATGAAGATGGAGAAAGGGGAAATGT
ATGGAAATTCTCCAAGATTTTTAGGTGCCACAAATTTGACTATGTATTCTAAGATCTCAAACTGTCAGAT
AAATAATCTGCATGTGTCTTATACTAACACTGATGTTCCAATACAAGTGAATAGTTCCAAATTGGTTCTT
CCAGGAAGTTCAAGTTTGAATGTAACTTCAGATCATATGAATACAGAAATTACTACTTATAAGAAGAAAT
TGAGTACTAATCAGCCATGCCATAAGACTGTAACAGATGAAGCTCAGAGCAACCTTAACACAACAGTTGG
ATTTTCAAAGTTTACATTTACAAGGATGAAAAATTCTCAGATTCTTTCTCAGTTTAATCAAAATTGTATA
ACTGGAAGTATGTCTGATACCAAAATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGG
AGGAAGCTGTTGGACAGCAATCTTTGGTGAAACTTTCTGAATCTTTGAAACAATCTTCAAAAGAGGAAGA
AGAGAAAAATAGAAAGTGTTCTCCTGAAGAAATTCAGAGAAAAAGACAAGAAGCACTGGTTCGGAGAATG
GCTAAAGCACGAGCCTCATCTGTAAATGCAGCTCCCACTTCATTTCTTTAA

Translation (926 aa):
MSRRRKHDDSPSPKKTPHKTVAAEECGSVVEPGRRRLRSARGSWPCGAREGPPGPVRQREQPPTAALCSK
SNPEERYETPKRALKMDSLSSSFSSPNDPDGQNDIFWDQNSPLTKQLGKGRKKQIYTTDSDEISHIVNRI
APQDEKPTTNSMLDMWIGETAIPCTPSVAKGKSRAKISCTKLKTQSQEEELMKLAKQFDKNMEELDVIQE
QNKRNYDFTQMISETEILSNYKDNIQMWSLHNIVPEIDNATKKPIKGNTKISVANNQNSSQKPFDQIAEA
AFNAIFDGSTQKCSGQLSQELPEAFWSTSNTTFVKTNALKEEKIITNETLVIEKLSNKTPRSLSSQVDTP
IMTKSCVTSCTKEPETSNKYIDAFTTSDFEDDWENLLGSEPFAMQNIDMPELFPSKTAHVTDQKEICTFN
SKTVKNTSRANTSPDARLGDSKVLQDLSSKTYDRELIDAEYRFSPNSNKSNKLSTGNKMKFENSSNKIVI
QDEIQNCIVTSNLTKIKEDILTNSTEASERKSALNTRYSNEQKNKCILNQSIKAPVNTDLFGSANLGSKT
SVSNPNQTSASKVGSFFDDWNDPSFANEIIKACHQLDNTWEADDVDDDLLYQACDDIERLTQQQDIRKDS
KTSESICEINNNSEHGAKLTQQQDIRKDSKTSESICEINNNSEHGAKNMFAISKQGSNLVQSKHLNPGSI
SVQTSLTNSSQIDKPMKMEKGEMYGNSPRFLGATNLTMYSKISNCQINNLHVSYTNTDVPIQVNSSKLVL
PGSSSLNVTSDHMNTEITTYKKKLSTNQPCHKTVTDEAQSNLNTTVGFSKFTFTRMKNSQILSQFNQNCI
TGSMSDTKITQGVEKKKGVNPLLEEAVGQQSLVKLSESLKQSSKEEEEKNRKCSPEEIQRKRQEALVRRM
AKARASSVNAAPTSFL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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