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Report for CCDS1928.3 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1928.3 Under review, update Homo sapiens 2 DUSP11 24 110 108 CCDS HistoryNCBI Gene:8446Re-query CCDS DB by CCDS ID:1928.3Re-query CCDS DB by GeneID:8446See the combined annotation on chromosome 2 in Sequence Viewer

Public Note for CCDS 1928.1
The coding region has been updated to shorten the 5' CDS to one that is more supported by available transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 1928.3

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272444.8 ENSP00000272444.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000272444.8Link to Ensembl Protein Viewer:ENSP00000272444.4Re-query CCDS DB by Nucleotide ID:ENST00000272444Re-query CCDS DB by Protein ID:ENSP00000272444
Original member Current member NCBI NM_003584.3 NP_003575.3 MANE Select Pending alive Link to Nucleotide Sequence:NM_003584.3Link to Protein Sequence:NP_003575.3Re-query CCDS DB by Nucleotide ID:NM_003584Re-query CCDS DB by Protein ID:NP_003575Link to BLAST:NP_003575.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003575.3 330 O75319-3 330 100% 0 0

Chromosomal Locations for CCDS 1928.3

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 73762661 73762859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73766418 73766594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73766828 73766903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73767161 73767207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73769265 73769325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73773800 73773923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73774913 73775044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73778301 73778376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 73779874 73779974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (993 nt):
ATGAGCCAGTGGCATCATCCCCGCAGTGGCTGGGGCCGGAGACGCGACTTTTCAGGACGCTCCTCAGCCA
AGAAGAAGGGCGGAAACCACATCCCCGAAAGGTGGAAAGACTATCTCCCAGTTGGACAGCGGATGCCTGG
GACTCGTTTCATTGCTTTCAAAGTTCCTTTGCAAAAGAGTTTTGAAAAGAAACTTGCTCCAGAAGAATGC
TTTTCCCCTTTGGATCTTTTTAACAAAATCCGAGAACAAAATGAAGAACTTGGACTGATTATTGATTTAA
CATATACTCAACGCTATTATAAACCAGAGGATTTGCCAGAAACTGTTCCTTACTTAAAAATTTTTACAGT
TGGACATCAAGTGCCTGATGATGAGACTATTTTTAAATTCAAACACGCTGTTAATGGGTTTTTGAAAGAA
AATAAAGATAATGATAAACTTATTGGTGTCCACTGTACCCATGGTTTAAACAGGACTGGCTACCTCATTT
GCAGATATTTGATTGATGTAGAAGGCGTGAGGCCAGATGATGCAATTGAATTATTCAATAGGTGCCGGGG
ACATTGCTTAGAAAGACAAAACTACATTGAAGACCTTCAGAATGGTCCTATCAGAAAGAATTGGAATTCC
AGTGTACCCAGGTCAAGTGATTTTGAAGACTCAGCACATCTCATGCAACCAGTCCACAATAAGCCTGTTA
AACAAGGACCTAGGTATAATCTACATCAGATCCAGGGTCACTCAGCTCCTCGACATTTCCACACCCAGAC
CCAAAGTTTGCAACAATCAGTCAGAAAATTTTCAGAGAATCCACATGTTTACCAGAGACACCATCTCCCT
CCTCCTGGTCCCCCTGGAGAGGACTATTCACACAGGAGGTATTCTTGGAATGTGAAGCCCAATGCCAGTC
GGGCAGCCCAGGATAGAAGAAGGTGGTATCCTTATAATTACTCCAGACTCTCCTATCCAGCCTGTTGGGA
ATGGACCCAGTGA

Translation (330 aa):
MSQWHHPRSGWGRRRDFSGRSSAKKKGGNHIPERWKDYLPVGQRMPGTRFIAFKVPLQKSFEKKLAPEEC
FSPLDLFNKIREQNEELGLIIDLTYTQRYYKPEDLPETVPYLKIFTVGHQVPDDETIFKFKHAVNGFLKE
NKDNDKLIGVHCTHGLNRTGYLICRYLIDVEGVRPDDAIELFNRCRGHCLERQNYIEDLQNGPIRKNWNS
SVPRSSDFEDSAHLMQPVHNKPVKQGPRYNLHQIQGHSAPRHFHTQTQSLQQSVRKFSENPHVYQRHHLP
PPGPPGEDYSHRRYSWNVKPNASRAAQDRRRWYPYNYSRLSYPACWEWTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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