CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS2070.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
2070.1 |
Public |
Homo sapiens |
2 |
FHL2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:2274](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:2070.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:2274](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 2 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana)
Attributes |
CDS uses downstream AUG |
Sequence IDs included in CCDS 2070.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000322142.13 |
ENSP00000322909.8 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000322142.13](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000322909.8](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000322142](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000322909](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000344213.9 |
ENSP00000344266.5 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000344213.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000344266.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000344213](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000344266](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000393352.7 |
ENSP00000377020.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000393352.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000377020.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000393352](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000377020](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000393353.7 |
ENSP00000377021.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000393353.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000377021.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000393353](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000377021](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000408995.5 |
ENSP00000386633.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000408995.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000386633.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000408995](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000386633](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000409807.5 |
ENSP00000386665.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000409807.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000386665.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000409807](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000386665](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000409177.6 |
ENSP00000386892.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000409177.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000386892.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000409177](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000386892](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000530340.6 |
ENSP00000433567.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000530340.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000433567.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000530340](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000433567](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001039492.3 |
NP_001034581.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001039492.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001034581.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001039492](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001034581](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001034581.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318894.1 |
NP_001305823.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318894.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305823.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318894](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305823](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305823.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318895.3 |
NP_001305824.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318895.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305824.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318895](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305824](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305824.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001318896.2 |
NP_001305825.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001318896.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001305825.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001318896](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001305825](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001305825.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001374399.1 |
NP_001361328.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001374399.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001361328.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001374399](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001361328](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001361328.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001450.4 |
NP_001441.4 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001450.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001441.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001450](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001441](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001441.4](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_201555.3 |
NP_963849.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_201555.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_963849.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_201555](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_963849](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_963849.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_201557.5 |
NP_963851.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_201557.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_963851.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_201557](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_963851](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_963851.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 2070.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (840 nt): ATGACTGAGCGCTTTGACTGCCACCATTGCAACGAATCTCTCTTTGGCAAGAAGTACATCCTGCGGGAGG AGAGCCCCTACTGCGTGGTGTGCTTTGAGACCCTGTTCGCCAACACCTGCGAGGAGTGTGGGAAGCCCAT CGGCTGTGACTGCAAGGACTTGTCTTACAAGGACCGGCACTGGCATGAAGCCTGTTTCCACTGCTCGCAG TGCAGAAACTCACTGGTGGACAAGCCCTTTGCTGCCAAGGAGGACCAGCTGCTCTGTACAGACTGCTATT CCAACGAGTACTCATCCAAGTGCCAGGAATGCAAGAAGACCATCATGCCAGGTACCCGCAAGATGGAGTA CAAGGGCAGCAGCTGGCATGAGACCTGCTTCATCTGCCACCGCTGCCAGCAGCCAATTGGAACCAAGAGT TTCATCCCCAAAGACAATCAGAATTTCTGTGTGCCCTGCTATGAGAAACAACATGCCATGCAGTGCGTTC AGTGCAAAAAGCCCATCACCACGGGAGGGGTCACTTACCGGGAGCAGCCCTGGCACAAGGAGTGCTTCGT GTGCACCGCCTGCAGGAAGCAGCTGTCTGGGCAGCGCTTCACAGCTCGCGATGACTTTGCCTACTGCCTG AACTGCTTCTGTGACTTGTATGCCAAGAAGTGTGCTGGGTGCACCAACCCCATCAGCGGACTTGGTGGCA CAAAATACATCTCCTTTGAGGAACGGCAGTGGCATAACGACTGCTTTAACTGTAAGAAGTGCTCCCTCTC ACTGGTGGGGCGTGGCTTCCTCACAGAGAGGGACGACATCCTGTGCCCCGACTGTGGGAAAGACATCTGA
Translation (279 aa): MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECGKPIGCDCKDLSYKDRHWHEACFHCSQ CRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKS FIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQPWHKECFVCTACRKQLSGQRFTARDDFAYCL NCFCDLYAKKCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI
|