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Report for CCDS21156.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21156.1 Public Mus musculus 7 Zfp536 23 108 98 CCDS HistoryNCBI Gene:243937Re-query CCDS DB by CCDS ID:21156.1Re-query CCDS DB by GeneID:243937See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21156.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000056338.12 ENSMUSP00000058468.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000056338.12Link to Ensembl Protein Viewer:ENSMUSP00000058468.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000056338Re-query CCDS DB by Protein ID:ENSMUSP00000058468
Original member Current member EBI ENSMUST00000175941.7 ENSMUSP00000134778.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000175941.7Link to Ensembl Protein Viewer:ENSMUSP00000134778.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000175941Re-query CCDS DB by Protein ID:ENSMUSP00000134778
Original member Current member EBI ENSMUST00000176205.7 ENSMUSP00000135068.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000176205.7Link to Ensembl Protein Viewer:ENSMUSP00000135068.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000176205Re-query CCDS DB by Protein ID:ENSMUSP00000135068
Original member Current member EBI ENSMUST00000176114.7 ENSMUSP00000135681.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000176114.7Link to Ensembl Protein Viewer:ENSMUSP00000135681.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000176114Re-query CCDS DB by Protein ID:ENSMUSP00000135681
Original member NCBI NM_172385.2 NP_759017.1 Updated not alive Link to Nucleotide Sequence:NM_172385.2Link to Protein Sequence:NP_759017.1Re-query CCDS DB by Nucleotide ID:NM_172385Re-query CCDS DB by Protein ID:NP_759017
Current member NCBI NM_172385.3 NP_759017.1 Accepted alive Link to Nucleotide Sequence:NM_172385.3Link to Protein Sequence:NP_759017.1Re-query CCDS DB by Nucleotide ID:NM_172385Re-query CCDS DB by Protein ID:NP_759017Link to BLAST:NP_759017.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_759017.1 1302 Q8K083 1302 100% 0 0

Chromosomal Locations for CCDS 21156.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 37479270 37480849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37493686 37493838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 37567814 37569989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3909 nt):
ATGGAAGAAGCGAGTCTGTGCCTTGGAGTGTCCTCGACGGCACCGGAAGCTGAGCCTCATCTGAGCGGCC
CAGTCCTCAATGGCCAGTATGCCATGAGCCAGAAGTTGCACCAGATCACTTCCCAGCTCAGCCATGCCTT
TCCTGAGTTGCACCCGCGGCCCAACCCAGAGGAGAAGACACCTGCGGCCCTTGAGGAGAAGGCCCACGTG
CCCATGAGCGGACAGTCCATGGGCAGCCAAATGGCACTGCTGGCCAACCAGCTGGGCCGTGATGTAGACA
ACAGCCTCAATGGGCGTGTGGATCTGCAGCAGTTCCTCAATGGGCAGAACCTAGGAATCATGTCTCAGAT
GAGTGACATTGAGGATGATGCCCGAAAGAACCGGAAGTATCCGTGTCCCCTGTGTGGCAAGCGTTTCCGG
TTCAATAGCATCCTCTCCCTGCACATGCGCACTCACACCGGTGAGAAGCCATTCAAGTGCCCCTACTGCG
ACCACCGCGCGGCCCAAAAAGGAAACCTCAAGATCCACCTGCGGACCCACAAGCTGGGCAACTTGGGGAA
GGGGCGCGGGCGGGTACGTGAGGAGAACCGTCTGCTGCACGAGCTGGAGGAGAGGGCCATCCTGCGGGAC
AAGCAAATGAAGGGCAGCCTGCTGCAGCCAAGGTCTGATCTCAAGCCCTTGGCACATGCCCAGCAGGCCC
CGTTGGCCACCTGCAACTTGGCCTTGCCTCCCAACCATAGCGTGCCCGATGTAGCCCACCCGGCACCTTC
CCCCAAGCCGGCCAATTTGCAGGAGGATTCGGTGACCCCGGCTGCGGGCTTCCGATGCACCTTTTGCAAA
GGCAAATTCAAGAAGCGAGAAGAGCTGGATCGCCACATCCGCATTTTGCATAAGCCCTACAAGTGCACAC
TGTGTGACTTTGCCGCCTCCCAGGAGGAGGAGCTCATCAGTCACGTGGAGAAGGCCCATATCACTGCGGA
GTCTGCCCAGGGCCAGGGCCCCAATGGTGGGGGAGAGCAGTCAGCAAACGAGTTCCGCTGTGAGGTATGT
GGCCAGGTGTTCAGCCAGGCCTGGTTCCTGAAGGGCCACATGCGCAAGCACAAAGACTCTTTTGAGCACT
GCTGCCAGATATGTGGGCGGCGCTTCAAAGAGCCTTGGTTCCTGAAGAATCACATGAAGGTCCACCTCAA
CAAGCTATCGGTGAAGAACAAATCCCCCACTGAGCCTGAGGTGGCGGTGCCCATGGGTGGCCTGTCCCAG
GAGGCCCATGCCAACCTATACTCTAGGTACCTCTCCTGCCTGCAGAGTGGCTTTATGGCCCCAGACAAAG
CCAGTCTGAATGAGCCCTCTCAGCTCTATGGCAAGGGGGAGCTCCCGGCCAAGGAGAAGGAGGTTCTGGG
AAAGCTACTGTCTCCCATTTCCAGTATGGCTCACAGTGTCCCCGAGGGGGACAAGCACTCCCTCCTGGGC
TGCCTCAACCTCGTGCCACCACTGAAATCCAGCTGCATCGAGCGGTTGCAGGCAGCTGCCAAAGCTGCAG
AAATGGACCCTGTGAATAGCTATCAGGCCTGGCAGCTCATGGCCAGGGGCATGGCCATGGAACACGGCTT
CTTATCTAAAGAGCATCAGCTCTCGCGCAACCACGAAGACCCTTTGGCAAACACCGGAGTTCTGTTTGAT
AAGGAGAAGCGGGAGTACGTGTTAGTGGGAGCAGATGGCTCCAAGCAGAAAATGCCTGCTGATTTGGTTC
ACAGCACTAAAGTGGGCAATCAGAGAGACCTGCCAAATAAGCTCGACCCTCTAGAAGGCAGTCGGGAATT
TTTGTCACATGGGCTCAACCAGACGCTAGACTACAACCTGCAGGGTCCTGGGAACATGAAAGAGAAACCC
ACTGAGTGCCCGGATTGTGGACGGGTTTTCCGAACCTACCACCAGGTGGTCGTGCATTCTCGAGTCCACA
AGCGGGACCGCAAGAGCGATGAGGACGCTCTGCACGTGGGTGTGGGCCTGGAGGAGAGGCGAGGCTCAGG
CAGCGACCAGGAGTCCCAGTCAGTGAGCCGCTCCACCACACCTGGCTCCTCTAACGTGACTGAGGAGAGT
GGGGCCGGAGGTGGCCTGTCGCAGACCGGAAGCGCCCAAGAGGATAGTCCACACCCCTCTTCACCATCTT
CCTCAGACATCGGCGAGGAGGCCGGGAGAGCCGGTGGCGTCCAGCAGCAGGCGCTGCTTCGAGACAGGAA
CCTGGGCTCGGCCATGAAGGACTGCCCGTACTGTGGGAAGACTTTCCGGACTTCCCATCACCTTAAGGTC
CACCTGAGGATACACACAGGTGAGAAGCCCTATAAGTGTCCTCACTGTGACTATGCTGGCACCCAGTCAG
CGTCCCTGAAGTATCACCTGGAGAGACACCATCGGGAGCGGCAGAATGGAGCCGGGCCCCTGTCAGGACA
GCCCCCGAACCAGGAGCACAAGGATGAGACCTCTAGCAAAGCGCCTATGTTCATCAGGCCGGACATCCTT
CGAGGGGCTTTTAAGGGTCTCCCCGGAATCGACTTCCGAGGTGGTCCCGCCTCTCAGCAGTGGACAGCCG
GCATGCTCTCCTCCGGAGATCATTCAGGGCAGGCCACTGGCATGCCCTCAGAGCTGTCTTCAGATGCCCT
AAAAGGCTCCGACCTTCCTTCCAAAAGCTCCCACTACTCGGAGATCGGAAGAGCTTATCAAAACATCGTG
AGCAACGGTGTGAATTTCCAAGGGTCCCTGCAGGCCTTCATGGACAGCTTTGTCCTCAGCTCTTTGAAGA
AAAAGGACACAAAGGACAAGGTCCCGTCTGATGCCCATCCCATGAAAGCCCATACTGCAGAGGGTGGAGA
GGAGAAAGCAAGCATGAAGCCCTCCCAGCGAAAGTCTGAGAAGTCTCAGTACGAACCTCTGGACTTGTCC
GTGCGGCCAGACGCCCCCACTCTCCCTGGCTCCTCCGTGACCGTGCAAGACAGCATCGCGTGGCACGGCT
GCTTGTTCTGCGCTTTCACCACCTCGTCCATGGAGCTGATGGCCCTTCACCTCCAGGCCAACCACCTAGG
CAGAGCAAAACGCAAAGATCACCCCACAGGGGTGACAGTCAACTGCAAAGAGCAGGGGCGGGAGGCCAGC
AAGGTCTCTGTACTGCCTTCCCTACAGTCAAACAAAGAGATGGCCCTTCCTAGCGCTGTTGGTGTGCTCG
ACTCTGCTCCTGAGAAGTTGGCCCAAGGGCCAGCCAAAGAGACTCTAGGGGACCCGAAGAGTGGTCAGTG
GCCCAACCACATGGACCCTGCCTTTTGTACCTTTCCATCTGACTTCTACAAACAGTTTGGCGTTTACCCC
GCTATGGTTGGCTCAGGGGCCCCGGGCTCCTGCCTCAACAAGAACACCGAGGGGAAAACCCACCCAGATG
ACGACGCCCCTATCCTGATCCCGGAAACCACGAACAAAAACACTACTGATGACCTCTCAGATATTGCCTC
CTCCGAGGACATGGACTCCTCCAAGGGAGAAAACAATGAGGACGAGGAGCTAGACACCGAACCAGAAATG
ACGAGCAAGCCTCTGTCTGCTCTCAGCAAGGATGGCAGCAGTGAGGGCGGCGACAGCCTGCTGTCCCCAG
GCGCCCCGCAGCCCATCCAGGGACTGGTCTCACCTTTAGCCCAAGCAGCCGAGGAACAGTGGCACAGCCC
AGGCCTCCTTCCTGCCCAGGACCCCTCGGCGGGGCTGCCCAAACCAGAGCGGGGTCCCCCGGGCTTGGAG
AAACCTATGAGCATGCTGTCGGTCCTCAGGGCCTACAGCGCCGATGGCTTAGCAGCCTTTAACGGGCTTG
CTAGCAGCACAGCAAATTCTGGATGTATCAAGAGGCCAGACTTGTGTGGTAAGTTTTAG

Translation (1302 aa):
MEEASLCLGVSSTAPEAEPHLSGPVLNGQYAMSQKLHQITSQLSHAFPELHPRPNPEEKTPAALEEKAHV
PMSGQSMGSQMALLANQLGRDVDNSLNGRVDLQQFLNGQNLGIMSQMSDIEDDARKNRKYPCPLCGKRFR
FNSILSLHMRTHTGEKPFKCPYCDHRAAQKGNLKIHLRTHKLGNLGKGRGRVREENRLLHELEERAILRD
KQMKGSLLQPRSDLKPLAHAQQAPLATCNLALPPNHSVPDVAHPAPSPKPANLQEDSVTPAAGFRCTFCK
GKFKKREELDRHIRILHKPYKCTLCDFAASQEEELISHVEKAHITAESAQGQGPNGGGEQSANEFRCEVC
GQVFSQAWFLKGHMRKHKDSFEHCCQICGRRFKEPWFLKNHMKVHLNKLSVKNKSPTEPEVAVPMGGLSQ
EAHANLYSRYLSCLQSGFMAPDKASLNEPSQLYGKGELPAKEKEVLGKLLSPISSMAHSVPEGDKHSLLG
CLNLVPPLKSSCIERLQAAAKAAEMDPVNSYQAWQLMARGMAMEHGFLSKEHQLSRNHEDPLANTGVLFD
KEKREYVLVGADGSKQKMPADLVHSTKVGNQRDLPNKLDPLEGSREFLSHGLNQTLDYNLQGPGNMKEKP
TECPDCGRVFRTYHQVVVHSRVHKRDRKSDEDALHVGVGLEERRGSGSDQESQSVSRSTTPGSSNVTEES
GAGGGLSQTGSAQEDSPHPSSPSSSDIGEEAGRAGGVQQQALLRDRNLGSAMKDCPYCGKTFRTSHHLKV
HLRIHTGEKPYKCPHCDYAGTQSASLKYHLERHHRERQNGAGPLSGQPPNQEHKDETSSKAPMFIRPDIL
RGAFKGLPGIDFRGGPASQQWTAGMLSSGDHSGQATGMPSELSSDALKGSDLPSKSSHYSEIGRAYQNIV
SNGVNFQGSLQAFMDSFVLSSLKKKDTKDKVPSDAHPMKAHTAEGGEEKASMKPSQRKSEKSQYEPLDLS
VRPDAPTLPGSSVTVQDSIAWHGCLFCAFTTSSMELMALHLQANHLGRAKRKDHPTGVTVNCKEQGREAS
KVSVLPSLQSNKEMALPSAVGVLDSAPEKLAQGPAKETLGDPKSGQWPNHMDPAFCTFPSDFYKQFGVYP
AMVGSGAPGSCLNKNTEGKTHPDDDAPILIPETTNKNTTDDLSDIASSEDMDSSKGENNEDEELDTEPEM
TSKPLSALSKDGSSEGGDSLLSPGAPQPIQGLVSPLAQAAEEQWHSPGLLPAQDPSAGLPKPERGPPGLE
KPMSMLSVLRAYSADGLAAFNGLASSTANSGCIKRPDLCGKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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