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Report for CCDS2164.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2164.1 Public Homo sapiens 2 AMER3 24 110 108 CCDS HistoryNCBI Gene:205147Re-query CCDS DB by CCDS ID:2164.1Re-query CCDS DB by GeneID:205147See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2164.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321420.5 ENSP00000314914.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000321420.5Link to Ensembl Protein Viewer:ENSP00000314914.4Re-query CCDS DB by Nucleotide ID:ENST00000321420Re-query CCDS DB by Protein ID:ENSP00000314914
Original member Current member EBI ENST00000423981.1 ENSP00000392700.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000423981.1Link to Ensembl Protein Viewer:ENSP00000392700.1Re-query CCDS DB by Nucleotide ID:ENST00000423981Re-query CCDS DB by Protein ID:ENSP00000392700
Original member Current member NCBI NM_001105193.2 NP_001098663.1 Accepted alive Link to Nucleotide Sequence:NM_001105193.2Link to Protein Sequence:NP_001098663.1Re-query CCDS DB by Nucleotide ID:NM_001105193Re-query CCDS DB by Protein ID:NP_001098663Link to BLAST:NP_001098663.1
Original member Current member NCBI NM_001105194.2 NP_001098664.1 Accepted alive Link to Nucleotide Sequence:NM_001105194.2Link to Protein Sequence:NP_001098664.1Re-query CCDS DB by Nucleotide ID:NM_001105194Re-query CCDS DB by Protein ID:NP_001098664Link to BLAST:NP_001098664.1
Original member Current member NCBI NM_001105195.2 NP_001098665.1 Accepted alive Link to Nucleotide Sequence:NM_001105195.2Link to Protein Sequence:NP_001098665.1Re-query CCDS DB by Nucleotide ID:NM_001105195Re-query CCDS DB by Protein ID:NP_001098665Link to BLAST:NP_001098665.1
Original member Current member NCBI NM_152698.3 NP_689911.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152698.3Link to Protein Sequence:NP_689911.2Re-query CCDS DB by Nucleotide ID:NM_152698Re-query CCDS DB by Protein ID:NP_689911Link to BLAST:NP_689911.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001098663.1 861 Q8N944 861 100% 0 0
NP_001098664.1 861 Q8N944 861 100% 0 0
NP_001098665.1 861 Q8N944 861 100% 0 0
NP_689911.2 861 Q8N944 861 100% 0 0

Chromosomal Locations for CCDS 2164.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 130762073 130764658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2586 nt):
ATGGAGCTGAAGAGAGGAAAGACCTTCATCAAGTCCAGCCTGCAGGTTTCCCACGAGAAACCCCCAGACC
CAGCAGCCGTGGCTGCAGCCAGGGAGGGGACAGGCCCCTGGTCAGTCCTTCCAGGAGGGCAACAGAGGCC
CCACAGTGAGAAGGGCCCCCAAGCCAGCCCCAGTGCCCAAGAATACGACAGATGCCCCAACAAAGGGGCG
CAGCTGGACCCCAAAGGGGGACCCGCAGCCCTCTGTGGAGCCACCTTCAAACCGGTGCGAAAGTGCAAGA
CTCACGACAGCATGTCTGGGGCAGGCAGGGCCACGGCTGCCACAGGGCAGCTGGTGGGCAGTGCAAGCTT
CCCGGGCTCCCCGGGCAGCCGGCGCATGATCGACTACCGCCACTTTGTGCCCCAGATGCCCTTTGTGCCA
GCTGTGGCCAAGAGCATCCCGAGGAAGAGGATTTCCCTGAAGAGGCCCAAGAAGTGCTTTCGGAACCTAT
TCCACATTCGGAGAAACAAGACTGAGGACTTGGCCTCGCTGGCGGCCGAGGGGAAAAGCCTGCCCTCCCC
AGGGGACCCGTCAGACCCTGGGGGGCGGCGAAGCAAAGCCTTCCTCCCCCCGGGTGAGGGGCCGGGGCTG
GACGGCCTGTGCCAGGACCTGTTGGACAGCGAGCTCCTGGCCGATGCATCCTTTGGTCTCTGCAGGGCCC
TGTGTGAGGACGTGGCCTCACTCCAGAGCTTCGACTCGCTCACGGGTTGTGGGGAGGTGTTCGCAGATGA
GAGCTCGGTGCCATCTCTGGAGCTGAACGAGGGCCCGGAGAGCCCAACCCAGGCTGCTCAGGGCCTGGAG
AGCAAGGTTCCCAGGGGCCCTCTCCAGGGCAGTGTGGAGCAGCTGGCCTCGCCCGCCCAGAATGAAGCCT
CTGACTTCACCAGGTTCTGGGACAGTGTGAATCGCTCAGTGCGTCAGCAGCAGCGTGCCCTCCTAGGCCC
GTGGCTTTCAGGCCCCCAGGGGACAGACAGGGACCAATCCCGGCTGGACACAGCTGGGCTCGCTGAGCTG
CCCCTCTGCCCCTGCAGGGACCCTCGCAGCGGCTCCAAAGCCAGCTCCATCGACACAGGCACCCCCAAGA
GCGAGCAGCCCGAATCCGTGTCCACAAGTGACGAGGGCTACTATGATTCCTTCTCGCCAGGACTTGAGGA
GGACAAGAAGGAAGCTGAGAGCCCAGGCACTCCTGCCGCCACCTTCCCACGGGACAGCTACAGTGGGGAC
GCCCTCTACGAGCTCTTCCACGACCCCAGCGAGGGTCCTCTTGGCCCCAGCCCAGATGATGACCTGTGCG
TGTCTGAGAGTCTGTCAGGGCCGGCCCTGGGGACGCCACTGTCCATATGCAGCTTCCGAGTGGGGGCCGA
GGAGAACTTGGCCCCAGCACCAGGCCCTGACCTGCTCAGCCAGGGCTTCCTACAGAGCTCCTGGAAGGGC
AAGGAGTGCCTGCTGAAGCTGTGTGACACTGAGCTCGCCATCACCATGGGCATCGTCAGCTGGCTGCGCC
GAGGCCCCACGCCCCGTGCCCCACCCACCCCTGGGCAGCCTGCAGCTCCACCTGGTTCCCAGGGAGCCCC
TAGGGCACCCACAGAGAAGCTGGGGGGCAGGGAGGGCCTGGCCTCAGATGCAGGGGGGGCGACAGTTTGC
TCAGCACCCAGCAGGCAGGAGCTGTGGGCACACCCGGGCACCACAGGCCTGCTCGCCGGAGAGAGCAAGG
CCCTCGGAGGGGCCACACAAGGGACTGGCACACTGTCCAGGGATGCCTCTCGAGAGGAAGAGACACGAGG
TCACTCTGAAGGCTTGTTCTCCTCTATGGAGTCTGCAGCCACTTCGACAACAGATACTTCCGGTAAAAAT
AAGGCCCCAGTTCCTTCTACCTGGCCCTGCTCCCAGAAGGAGCCTGGGCCACCAGGGGTCCTGGGGTGTT
TCCGAGGCCCCTGGAGGCCAGGTCACGGAGGTGACACTCTGGATGCAGAGCCCATGCTGGCAGGCTGTGT
GGCCCGTGTGGCAGCCCTGAAGATCAGCTCAAACGAACAGCCCCCGGCCGCATGGCCTCCAAGGCAAGAC
ATGGGCAGTGGGCTCTTTGGGCAGCGCTGGGCCAGGGGCCCTGACATGCTGGAGCAGAAACAGTCCAGCA
GCTCCCCCAGCATGACCACCATCCATGGCCTACCCTACTCAGCCAGCACACAGGACCAGAGGTGTCGAGA
TCGTGTCCAGGACCTGAGCTGGCTCAGGGTGGAGCCCACCGGGCTAGGTGTCCAGGCCTGGGCCTCTGTG
GAGGACCAGCCCTTGCAGCTCAGCACAGAGGCTGTGGAGCAGGTGGCACACGGCAGCCAGCTGGACTCTG
AGCCCCGCTCAGCCCCTGCTGCCCGGTGGAGTTCCCAGGGCCACCATCCAGAAAGCCTGGGCCTCACTTT
GAACAGCCAGCAGGAAGGGGGGGTCTCTGCAAGTGCCCCAGAATGCCGCTGCAGCCTCCTGGCCCGTGAG
GGCCTCCTCTGTGGCCAGCCAGAAGTGGGGGCCTCTGGGCCAGCCATGGCTGAGCCCCATCTGTAG

Translation (861 aa):
MELKRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWSVLPGGQQRPHSEKGPQASPSAQEYDRCPNKGA
QLDPKGGPAALCGATFKPVRKCKTHDSMSGAGRATAATGQLVGSASFPGSPGSRRMIDYRHFVPQMPFVP
AVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDLASLAAEGKSLPSPGDPSDPGGRRSKAFLPPGEGPGL
DGLCQDLLDSELLADASFGLCRALCEDVASLQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLE
SKVPRGPLQGSVEQLASPAQNEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAEL
PLCPCRDPRSGSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGD
ALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLSQGFLQSSWKG
KECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVC
SAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKN
KAPVPSTWPCSQKEPGPPGVLGCFRGPWRPGHGGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQD
MGSGLFGQRWARGPDMLEQKQSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEPTGLGVQAWASV
EDQPLQLSTEAVEQVAHGSQLDSEPRSAPAARWSSQGHHPESLGLTLNSQQEGGVSASAPECRCSLLARE
GLLCGQPEVGASGPAMAEPHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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