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Report for CCDS2189.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2189.1 Public Homo sapiens 2 MMADHC 24 110 108 CCDS HistoryNCBI Gene:27249Re-query CCDS DB by CCDS ID:2189.1Re-query CCDS DB by GeneID:27249See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2189.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303319.10 ENSP00000301920.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000303319.10Link to Ensembl Protein Viewer:ENSP00000301920.5Re-query CCDS DB by Nucleotide ID:ENST00000303319Re-query CCDS DB by Protein ID:ENSP00000301920
Original member Current member EBI ENST00000428879.5 ENSP00000389060.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428879.5Link to Ensembl Protein Viewer:ENSP00000389060.1Re-query CCDS DB by Nucleotide ID:ENST00000428879Re-query CCDS DB by Protein ID:ENSP00000389060
Original member Current member NCBI NM_015702.3 NP_056517.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015702.3Link to Protein Sequence:NP_056517.1Re-query CCDS DB by Nucleotide ID:NM_015702Re-query CCDS DB by Protein ID:NP_056517Link to BLAST:NP_056517.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056517.1 296 Q9H3L0 296 100% 0 0

Chromosomal Locations for CCDS 2189.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 149569974 149570168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 149571085 149571171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 149575711 149575841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 149576437 149576542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 149579431 149579648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 149582127 149582271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 149587089 149587097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (891 nt):
ATGGCCAATGTGCTTTGTAACAGAGCCAGACTGGTTTCCTATCTCCCAGGATTTTGCTCTTTAGTTAAAA
GGGTTGTCAATCCCAAAGCCTTTTCGACTGCAGGATCATCAGGTTCGGATGAGTCTCATGTGGCTGCTGC
ACCTCCAGATATATGCTCTCGAACAGTGTGGCCTGATGAAACTATGGGACCCTTTGGACCTCAAGATCAG
AGGTTCCAGCTTCCTGGGAACATAGGTTTTGATTGTCACCTCAATGGGACTGCTTCACAGAAGAAAAGCC
TGGTTCATAAAACTTTGCCTGATGTTCTAGCAGAACCTTTATCAAGTGAAAGACATGAGTTTGTGATGGC
ACAATATGTGAATGAATTTCAGGGTAATGATGCACCTGTTGAACAAGAAATTAACAGTGCAGAAACTTAC
TTTGAAAGTGCCAGAGTAGAGTGTGCAATACAGACATGTCCAGAATTGCTGCGAAAAGATTTTGAATCAC
TGTTTCCAGAAGTAGCTAATGGCAAACTAATGATTCTGACTGTAACACAAAAAACTAAGAATGATATGAC
TGTTTGGAGTGAAGAAGTAGAAATTGAAAGAGAAGTGCTCTTAGAAAAGTTCATCAATGGTGCTAAGGAA
ATTTGCTATGCTCTTCGAGCTGAGGGTTATTGGGCTGACTTTATTGACCCATCATCTGGTTTGGCATTTT
TTGGACCATATACAAACAACACTCTTTTTGAAACTGATGAACGCTACCGACATTTAGGATTCTCTGTTGA
TGACCTTGGATGCTGTAAAGTGATTCGTCATAGTCTCTGGGGTACCCATGTAGTTGTAGGGAGTATCTTC
ACTAATGCAACACCAGACAGCCATATTATGAAGAAATTAAGTGGAAATTAG

Translation (296 aa):
MANVLCNRARLVSYLPGFCSLVKRVVNPKAFSTAGSSGSDESHVAAAPPDICSRTVWPDETMGPFGPQDQ
RFQLPGNIGFDCHLNGTASQKKSLVHKTLPDVLAEPLSSERHEFVMAQYVNEFQGNDAPVEQEINSAETY
FESARVECAIQTCPELLRKDFESLFPEVANGKLMILTVTQKTKNDMTVWSEEVEIEREVLLEKFINGAKE
ICYALRAEGYWADFIDPSSGLAFFGPYTNNTLFETDERYRHLGFSVDDLGCCKVIRHSLWGTHVVVGSIF
TNATPDSHIMKKLSGN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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