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Report for CCDS22630.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22630.1 Public Mus musculus 8 Pla2g15 23 108 98 CCDS HistoryNCBI Gene:192654Re-query CCDS DB by CCDS ID:22630.1Re-query CCDS DB by GeneID:192654See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22630.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034377.7 ENSMUSP00000034377.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034377.7Link to Ensembl Protein Viewer:ENSMUSP00000034377.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000034377Re-query CCDS DB by Protein ID:ENSMUSP00000034377
Original member Current member NCBI NM_133792.3 NP_598553.1 Accepted alive Link to Nucleotide Sequence:NM_133792.3Link to Protein Sequence:NP_598553.1Re-query CCDS DB by Nucleotide ID:NM_133792Re-query CCDS DB by Protein ID:NP_598553Link to BLAST:NP_598553.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598553.1 412 Q8VEB4 412 100% 0 0

Chromosomal Locations for CCDS 22630.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 106150487 106150613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106154868 106155024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106160163 106160281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106160581 106160679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106161084 106161308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 106162825 106163336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1239 nt):
ATGGATCGCCATCTCTGCACCTGTCGCGAGACCCAGCTCCGGAGTGGCCTCCTGTTACCTCTGTTTCTAC
TAATGATGCTGGCAGACCTGACGCTCCCGGCCCAACGTCACCCCCCGGTGGTGCTGGTGCCTGGTGATTT
GGGTAACCAGTTGGAAGCAAAGCTGGATAAGCCAAAGGTTGTACACTACCTTTGCTCCAAGAAGACGGAC
AGCTACTTCACACTCTGGCTGAATCTGGAACTGCTTCTGCCTGTTATCATTGACTGCTGGATTGACAATA
TCAGGCTGGTTTACAACAGAACATCTCGGGCCACCCAGTTTCCCGATGGTGTGGACGTGCGTGTCCCTGG
CTTTGGGGAAACATTTTCTATGGAATTCCTAGACCCCAGCAAGAGGAATGTGGGTTCCTATTTCTACACT
ATGGTGGAGAGCCTTGTGGGCTGGGGCTACACACGGGGTGAAGACGTTCGAGGTGCTCCCTATGATTGGC
GGCGAGCCCCAAATGAAAACGGGCCCTACTTCTTGGCCCTGCGAGAGATGATCGAGGAGATGTACCAGAT
GTATGGGGGCCCCGTGGTGCTGGTCGCCCACAGCATGGGCAACGTGTACATGCTCTACTTTCTGCAGCGG
CAGCCACAAGTCTGGAAGGACAAATATATCCATGCCTTCGTCTCACTGGGGGCGCCCTGGGGGGGCGTGG
CCAAGACGCTGCGTGTCCTGGCCTCAGGAGACAACAATCGCATTCCCGTCATTGGGCCACTGAAGATCCG
GGAACAGCAGCGATCTGCCGTCTCTACCAGCTGGCTACTGCCATACAACCACACTTGGTCACATGAAAAG
GTATTTGTATACACACCCACGACTAACTACACGCTCCGGGACTATCACCGGTTCTTCCGGGACATCGGTT
TCGAAGATGGCTGGTTCATGCGGCAGGACACAGAAGGGCTGGTTGAAGCCATGACGCCACCCGGGGTGGA
GCTGCACTGCTTGTATGGCACTGGTGTTCCCACGCCAAACTCTTTCTACTACGAGAGCTTTCCTGATCGG
GACCCCAAAATCTGCTTCGGCGATGGTGACGGCACGGTGAACCTGGAGAGCGTCCTGCAGTGCCAAGCCT
GGCAGAGCCGCCAAGAGCACAGAGTATCATTGCAGGAGCTGCCGGGAAGCGAGCACATTGAGATGCTAGC
CAATGCCACCACCTTGGCTTATCTGAAACGTGTGCTTCTGGAACCTTGA

Translation (412 aa):
MDRHLCTCRETQLRSGLLLPLFLLMMLADLTLPAQRHPPVVLVPGDLGNQLEAKLDKPKVVHYLCSKKTD
SYFTLWLNLELLLPVIIDCWIDNIRLVYNRTSRATQFPDGVDVRVPGFGETFSMEFLDPSKRNVGSYFYT
MVESLVGWGYTRGEDVRGAPYDWRRAPNENGPYFLALREMIEEMYQMYGGPVVLVAHSMGNVYMLYFLQR
QPQVWKDKYIHAFVSLGAPWGGVAKTLRVLASGDNNRIPVIGPLKIREQQRSAVSTSWLLPYNHTWSHEK
VFVYTPTTNYTLRDYHRFFRDIGFEDGWFMRQDTEGLVEAMTPPGVELHCLYGTGVPTPNSFYYESFPDR
DPKICFGDGDGTVNLESVLQCQAWQSRQEHRVSLQELPGSEHIEMLANATTLAYLKRVLLEP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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