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Report for CCDS2278.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2278.1 Public Homo sapiens 2 OSBPL6 24 110 108 CCDS HistoryNCBI Gene:114880Re-query CCDS DB by CCDS ID:2278.1Re-query CCDS DB by GeneID:114880See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2278.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315022.2 ENSP00000318723.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000315022.2Link to Ensembl Protein Viewer:ENSP00000318723.2Re-query CCDS DB by Nucleotide ID:ENST00000315022Re-query CCDS DB by Protein ID:ENSP00000318723
Original member Current member NCBI NM_145739.3 NP_665682.1 Accepted alive Link to Nucleotide Sequence:NM_145739.3Link to Protein Sequence:NP_665682.1Re-query CCDS DB by Nucleotide ID:NM_145739Re-query CCDS DB by Protein ID:NP_665682Link to BLAST:NP_665682.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_665682.1 938 Q9BZF3-3 938 100% 0 0

Chromosomal Locations for CCDS 2278.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 178320364 178320402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178324177 178324269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178328256 178328378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178331552 178331605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178332641 178332754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178332871 178333041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178336301 178336433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178338991 178339094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178339672 178339764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178344286 178344360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178349224 178349389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178361682 178361815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178372126 178372233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178373890 178374027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178382420 178382507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178383024 178383277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178384039 178384176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178385458 178385521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178387061 178387139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178389009 178389153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178391073 178391217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178392412 178392538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178394313 178394435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178395451 178395559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2817 nt):
ATGCATCAGTTATCTCTGATCAGGGGAAACAGAGGGCGGAGTATTCACATACTGGAGAGGACTGCTTCCT
CTAGCACCGAGCCCTCTGTAAGTCGGCAATTGCTAGAACCGGAGCCAGTCCCCCTCTCCAAGGAAGCTGA
CAGCTGGGAAATTATAGAAGGGCTGAAAATAGGCCAAACCAATGTCCAGAAACCAGACAAACATGAGGGC
TTTATGCTGAAGAAAAGAAAATGGCCTTTAAAAGGCTGGCACAAGCGTTTTTTTGTCCTGGATAATGGAA
TGTTAAAGTATTCAAAGGCACCACTCGATATTCAGAAAGGAAAGGTCCATGGGAGCATAGATGTGGGACT
CTCAGTCATGTCAATTAAAAAGAAAGCTCGAAGAATAGACCTTGACACCGAAGAGCACATCTATCATTTG
AAGGTGAAATCCCAGGACTGGTTTGATGCATGGGTCTCCAAACTGCGACATCATCGGTTGTATCGTCAGA
ATGAAATTGTGAGATCACCAAGAGATGCTAGTTTTCACATATTTCCTTCAACGTCCACAGCTGAATCCTC
ACCAGCTGCTAATGTTTCTGTAATGGATGGAAAGATGCAACCAAACAGCTTTCCGTGGCAGTCCCCTTTA
CCATGCAGCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGCCTGGTTACAGGACT
CGGAAGAGATGGACAGGTGTGCAGAAGATCTTGCACATTGCCAGTCAAACCTTGTGGAACTTAGCAAACT
CCTGCAAAATTTGGAAATACTTCAGAGAACTCAGTCGGCACCTAACTTTACTGACATGCAGGCTAACTGT
GTAGATATTTCAAAGAAAGACAAGCGGGTCACAAGACGATGGAGAACAAAAAGTGTCAGCAAAGATACAA
AAATACAACTGCAGGAAGGGCCACCCGCGAAGGGCCAGTTCAGCACAACTCGGCGCCGGCAGAGGCTAGC
GGCAGCAGTGGCTACAACAGTTCCTTTCAGTGCTACCATGTCACCAGTTCGCTTGCATTCCTCCAACCCC
AACCTTTGTGCAGATATTGAATTTCAGACTCCCCCTAGCCACCTCACTGACCCTCTGGAAAGTTCAACAG
ATTATACAAAGCTGCAAGAAGAATTTTGTCTAATCGCACAGAAAGTGCATTCTCTTTTGAAGTCTGCATT
TAATAGCATAGCTATAGAGAAGGAGAAGCTGAAGCAGATGGTTTCCGAGCAGGATCACAGTAAAGGCCAC
AGCACGCAGATGGCACGGCTCCGACAGTCACTGTCTCAGGCACTCAACCAGAATGCTGAACTAAGGAGTC
GGTTGAACAGAATACATTCAGAGTCTATTATTTGTGATCAGGTTGTCAGTGTAAATATTATTCCTAGCCC
TGATGAGGCTGGTGAGCAAATCCATGTCAGTCTCCCCTTATCACAGCAAGTAGCCAATGAGAGCCGCCTC
TCCATGTCAGAGTCTGTTTCTGAGTTCTTTGATGCCCAAGAGGTGCTCCTCTCTGCAAGTTCGTCAGAGA
ATGAGGCTTCAGATGATGAGTCTTACATCAGTGATGTGAGTGATAATATATCTGAAGACAACACCAGTGT
TGCAGACAATATTTCTCGGCAAATCCTGAATGGGGAGCTTACAGGAGGGGCCTTCCGAAATGGGCGTCGA
GCATGCCTGCCAGCTCCTTGTCCTGACACCAGTAACATTAACCTGTGGAATATCTTGAGGAACAACATTG
GTAAAGACCTGTCTAAAGTCTCTATGCCTGTGGAGCTAAACGAGCCGCTCAACACCCTGCAGCACCTCTG
TGAGGAAATGGAATACAGCGAGCTCCTGGACAAGGCTTCGGAAACTGATGATCCATATGAGCGCATGGTT
CTCGTTGCCGCATTTGCAGTTTCAGGATACTGCTCCACCTATTTCAGAGCAGGAAGTAAGCCATTCAACC
CAGTCCTTGGGGAGACTTATGAATGCATTAGAGAAGACAAGGGATTCCGCTTTTTCTCAGAACAGGTTAG
CCATCATCCACCCATTTCTGCCTGTCACTGTGAATCAAAGAATTTTGTGTTTTGGCAAGATATCAGATGG
AAAAACAAGTTCTGGGGGAAGTCGATGGAAATCCTGCCTGTTGGAACACTGAATGTCATGCTTCCAAAGT
ATGGAGATTACTATGTGTGGAATAAAGTCACCACTTGCATACACAACATCCTCAGTGGGAGAAGATGGAT
AGAACATTATGGAGAAGTAACCATCAGAAATACCAAAAGCAGTGTTTGCATTTGCAAACTCACATTTGTC
AAGGTGAATTATTGGAATTCTAACATGAATGAAGTCCAGGGGGTGGTGATAGATCAGGAGGGGAAGGCGG
TGTACCGGCTGTTTGGAAAGTGGCATGAAGGACTCTACTGTGGTGTGGCCCCCTCTGCAAAGTGCATTTG
GAGACCAGGTTCCATGCCAACAAACTATGAGCTGTACTATGGCTTCACAAGGTTTGCTATTGAGCTCAAT
GAGTTAGATCCAGTACTAAAAGATCTCCTTCCACCAACAGACGCCCGGTTCCGGCCAGATCAAAGATTTT
TGGAAGAAGGAAATTTAGAAGCTGCAGCATCAGAGAAGCAAAGAGTAGAGGAACTCCAGAGATCTCGGAG
ACGATATATGGAAGAAAACAATCTTGAACATATACCAAAATTTTTTAAAAAAGTTATTGATGCCAATCAA
AGAGAAGCCTGGGTTTCTAACGACACCTACTGGGAGCTTCGAAAGGACCCTGGGTTTAGCAAAGTAGACA
GCCCTGTTCTTTGGTAG

Translation (938 aa):
MHQLSLIRGNRGRSIHILERTASSSTEPSVSRQLLEPEPVPLSKEADSWEIIEGLKIGQTNVQKPDKHEG
FMLKKRKWPLKGWHKRFFVLDNGMLKYSKAPLDIQKGKVHGSIDVGLSVMSIKKKARRIDLDTEEHIYHL
KVKSQDWFDAWVSKLRHHRLYRQNEIVRSPRDASFHIFPSTSTAESSPAANVSVMDGKMQPNSFPWQSPL
PCSNSLPATCTTGQSKVAAWLQDSEEMDRCAEDLAHCQSNLVELSKLLQNLEILQRTQSAPNFTDMQANC
VDISKKDKRVTRRWRTKSVSKDTKIQLQEGPPAKGQFSTTRRRQRLAAAVATTVPFSATMSPVRLHSSNP
NLCADIEFQTPPSHLTDPLESSTDYTKLQEEFCLIAQKVHSLLKSAFNSIAIEKEKLKQMVSEQDHSKGH
STQMARLRQSLSQALNQNAELRSRLNRIHSESIICDQVVSVNIIPSPDEAGEQIHVSLPLSQQVANESRL
SMSESVSEFFDAQEVLLSASSSENEASDDESYISDVSDNISEDNTSVADNISRQILNGELTGGAFRNGRR
ACLPAPCPDTSNINLWNILRNNIGKDLSKVSMPVELNEPLNTLQHLCEEMEYSELLDKASETDDPYERMV
LVAAFAVSGYCSTYFRAGSKPFNPVLGETYECIREDKGFRFFSEQVSHHPPISACHCESKNFVFWQDIRW
KNKFWGKSMEILPVGTLNVMLPKYGDYYVWNKVTTCIHNILSGRRWIEHYGEVTIRNTKSSVCICKLTFV
KVNYWNSNMNEVQGVVIDQEGKAVYRLFGKWHEGLYCGVAPSAKCIWRPGSMPTNYELYYGFTRFAIELN
ELDPVLKDLLPPTDARFRPDQRFLEEGNLEAAASEKQRVEELQRSRRRYMEENNLEHIPKFFKKVIDANQ
REAWVSNDTYWELRKDPGFSKVDSPVLW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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