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Report for CCDS2289.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2289.1 Public Homo sapiens 2 DUSP19 24 110 108 CCDS HistoryNCBI Gene:142679Re-query CCDS DB by CCDS ID:2289.1Re-query CCDS DB by GeneID:142679See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2289.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354221.5 ENSP00000346160.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000354221.5Link to Ensembl Protein Viewer:ENSP00000346160.4Re-query CCDS DB by Nucleotide ID:ENST00000354221Re-query CCDS DB by Protein ID:ENSP00000346160
Original member Current member NCBI NM_080876.4 NP_543152.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_080876.4Link to Protein Sequence:NP_543152.1Re-query CCDS DB by Nucleotide ID:NM_080876Re-query CCDS DB by Protein ID:NP_543152Link to BLAST:NP_543152.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_543152.1 217 Q8WTR2-1 217 100% 0 0

Chromosomal Locations for CCDS 2289.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 183078934 183079159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 183083508 183083554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 183087040 183087192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 183095431 183095658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (654 nt):
ATGTACTCCCTTAACCAGGAAATTAAAGCATTCTCCCGGAATAATCTCAGGAAGCAATGCACCAGGGTGA
CAACGCTAACTGGAAAGAAAATTATAGAAACATGGAAAGATGCCAGAATTCATGTTGTGGAAGAAGTAGA
GCCGAGCAGTGGGGGTGGTTGTGGTTATGTGCAGGACCTTAGCTCGGACCTGCAAGTTGGCGTTATTAAG
CCATGGTTGCTCCTAGGGTCACAAGATGCTGCTCATGATTTGGATACACTGAAAAAGAATAAGGTGACTC
ATATTCTTAATGTTGCATATGGAGTTGAAAATGCTTTCCTCAGTGACTTTACATATAAGAGCATTTCTAT
ATTGGATCTGCCTGAAACCAACATCCTGTCTTATTTTCCAGAATGTTTTGAATTTATTGAAGAAGCAAAA
AGAAAAGATGGAGTGGTTCTTGTTCATTGTAATGCAGGCGTTTCCAGGGCTGCTGCAATTGTAATAGGTT
TCCTGATGAATTCTGAACAAACCTCATTTACCAGTGCTTTTTCTTTGGTGAAAAATGCAAGACCTTCCAT
ATGTCCAAATTCTGGCTTCATGGAGCAGCTTCGTACATATCAAGAGGGCAAAGAAAGCAATAAGTGTGAC
AGAATACAGGAGAACAGTTCATGA

Translation (217 aa):
MYSLNQEIKAFSRNNLRKQCTRVTTLTGKKIIETWKDARIHVVEEVEPSSGGGCGYVQDLSSDLQVGVIK
PWLLLGSQDAAHDLDTLKKNKVTHILNVAYGVENAFLSDFTYKSISILDLPETNILSYFPECFEFIEEAK
RKDGVVLVHCNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFMEQLRTYQEGKESNKCD
RIQENSS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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