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Report for CCDS2307.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2307.1 Public Homo sapiens 2 NAB1 24 110 108 CCDS HistoryNCBI Gene:4664Re-query CCDS DB by CCDS ID:2307.1Re-query CCDS DB by GeneID:4664See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2307.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337386.10 ENSP00000336894.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000337386.10Link to Ensembl Protein Viewer:ENSP00000336894.5Re-query CCDS DB by Nucleotide ID:ENST00000337386Re-query CCDS DB by Protein ID:ENSP00000336894
Original member Current member EBI ENST00000409581.5 ENSP00000387089.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409581.5Link to Ensembl Protein Viewer:ENSP00000387089.1Re-query CCDS DB by Nucleotide ID:ENST00000409581Re-query CCDS DB by Protein ID:ENSP00000387089
Original member Current member NCBI NM_001321312.2 NP_001308241.1 Accepted alive Link to Nucleotide Sequence:NM_001321312.2Link to Protein Sequence:NP_001308241.1Re-query CCDS DB by Nucleotide ID:NM_001321312Re-query CCDS DB by Protein ID:NP_001308241Link to BLAST:NP_001308241.1
Original member Current member NCBI NM_001321313.1 NP_001308242.1 Accepted alive Link to Nucleotide Sequence:NM_001321313.1Link to Protein Sequence:NP_001308242.1Re-query CCDS DB by Nucleotide ID:NM_001321313Re-query CCDS DB by Protein ID:NP_001308242Link to BLAST:NP_001308242.1
Original member Current member NCBI NM_005966.4 NP_005957.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005966.4Link to Protein Sequence:NP_005957.2Re-query CCDS DB by Nucleotide ID:NM_005966Re-query CCDS DB by Protein ID:NP_005957Link to BLAST:NP_005957.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308241.1 487 Q13506-1 487 100% 0 0
NP_001308242.1 487 Q13506-1 487 100% 0 0
NP_005957.2 487 Q13506-1 487 100% 0 0

Chromosomal Locations for CCDS 2307.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 190659177 190659995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190670326 190670459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190673101 190673152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190683738 190683827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190685476 190685638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190687201 190687317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190690245 190690333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1464 nt):
ATGGCTGCGGCCTTACCCAGGACCCTGGGGGAGTTGCAGCTGTATAGAATATTACAAAAAGCCAATCTAC
TTTCTTATTTTGATGCCTTTATCCAACAAGGTGGTGATGATGTCCAGCAACTCTGTGAAGCAGGAGAAGA
GGAGTTTTTGGAAATCATGGCACTCGTGGGCATGGCTAGCAAGCCCCTTCATGTTAGAAGGCTGCAGAAG
GCTTTGAGAGACTGGGTCACAAACCCTGGGCTTTTCAATCAGCCACTGACTTCCCTTCCTGTCAGTAGCA
TACCCATCTATAAATTACCAGAGGGATCACCAACATGGCTGGGAATATCCTGCAGTAGTTATGAAAGGAG
TAGCAATGCCCGGGAACCTCATTTAAAAATCCCCAAATGTGCTGCCACCACCTGTGTGCAGAGCTTGGGA
CAGGGGAAGTCAGATGTGGTTGGGAGCCTAGCACTGCAGAGTGTTGGTGAGTCCAGACTCTGGCAAGGCC
ACCATGCCACTGAGAGCGAGCACAGCCTCTCCCCAGCAGACCTGGGCTCCCCCGCGTCCCCAAAGGAGAG
CAGTGAGGCGCTGGATGCTGCTGCTGCGCTCTCTGTGGCTGAGTGTGTGGAGCGGATGGCCCCCACACTG
CCAAAAAGTGACTTGAATGAAGTGAAAGAGCTGCTAAAAACCAACAAGAAGTTGGCCAAAATGATTGGTC
ACATCTTTGAGATGAACGATGATGATCCACACAAAGAGGAGGAAATTCGGAAATACAGTGCAATATATGG
CAGATTTGACTCAAAGAGGAAGGATGGGAAACATCTCACACTTCATGAGCTCACTGTTAATGAAGCGGCT
GCTCAACTCTGTGTGAAGGATAATGCCCTGCTGACAAGAAGAGATGAGCTTTTTGCCTTGGCTCGACAGA
TTTCTCGAGAAGTCACCTATAAATATACTTACAGAACCACCAAGTCAAAATGTGGAGAAAGAGATGAATT
ATCCCCAAAGAGAATTAAAGTGGAGGATGGGTTTCCAGATTTCCAGGATTCTGTGCAAACACTCTTCCAG
CAGGCTAGAGCTAAGAGTGAAGAACTTGCAGCTCTTAGTTCACAGCAGCCTGAAAAGGTGATGGCAAAGC
AGATGGAGTTCCTTTGCAACCAAGCTGGCTATGAGAGACTGCAGCATGCCGAGAGGAGGTTGTCTGCAGG
GCTTTACAGGCAGAGCTCAGAAGAGCACAGTCCTAACGGCTTGACTTCCGATAACTCAGATGGACAAGGA
GAAAGACCTTTGAATCTCCGAATGCCTAATTTACAGAACAGACAACCCCATCATTTTGTGGTGGATGGGG
AGCTGAGCAGACTTTACCCCAGTGAGGCAAAGTCCCACTCATCAGAGAGCCTTGGGATTTTAAAAGACTA
CCCTCATTCAGCTTTTACCTTAGAAAAGAAAGTCATCAAAACAGAGCCTGAAGATTCAAGATAG

Translation (487 aa):
MAAALPRTLGELQLYRILQKANLLSYFDAFIQQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQK
ALRDWVTNPGLFNQPLTSLPVSSIPIYKLPEGSPTWLGISCSSYERSSNAREPHLKIPKCAATTCVQSLG
QGKSDVVGSLALQSVGESRLWQGHHATESEHSLSPADLGSPASPKESSEALDAAAALSVAECVERMAPTL
PKSDLNEVKELLKTNKKLAKMIGHIFEMNDDDPHKEEEIRKYSAIYGRFDSKRKDGKHLTLHELTVNEAA
AQLCVKDNALLTRRDELFALARQISREVTYKYTYRTTKSKCGERDELSPKRIKVEDGFPDFQDSVQTLFQ
QARAKSEELAALSSQQPEKVMAKQMEFLCNQAGYERLQHAERRLSAGLYRQSSEEHSPNGLTSDNSDGQG
ERPLNLRMPNLQNRQPHHFVVDGELSRLYPSEAKSHSSESLGILKDYPHSAFTLEKKVIKTEPEDSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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