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Report for CCDS2325.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2325.1 Public Homo sapiens 2 BOLL 24 110 108 CCDS HistoryNCBI Gene:66037Re-query CCDS DB by CCDS ID:2325.1Re-query CCDS DB by GeneID:66037See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2325.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392296.9 ENSP00000376116.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392296.9Link to Ensembl Protein Viewer:ENSP00000376116.4Re-query CCDS DB by Nucleotide ID:ENST00000392296Re-query CCDS DB by Protein ID:ENSP00000376116
Original member Current member EBI ENST00000433157.1 ENSP00000396099.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000433157.1Link to Ensembl Protein Viewer:ENSP00000396099.1Re-query CCDS DB by Nucleotide ID:ENST00000433157Re-query CCDS DB by Protein ID:ENSP00000396099
Original member Current member NCBI NM_033030.6 NP_149019.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033030.6Link to Protein Sequence:NP_149019.1Re-query CCDS DB by Nucleotide ID:NM_033030Re-query CCDS DB by Protein ID:NP_149019Link to BLAST:NP_149019.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149019.1 283 Q8N9W6-1 283 100% 0 0

Chromosomal Locations for CCDS 2325.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 197728555 197728578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197743061 197743159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197756428 197756556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197757353 197757400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197766532 197766603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197771855 197771982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197775665 197775740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197777059 197777113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197778975 197779066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 197781722 197781850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (852 nt):
ATGCAAACAGATTCATTATCTCCATCCCCTAATCCTGTGTCACCTGTGCCTTTGAATAACCCAACAAGTG
CCCCAAGATATGGAACAGTGATCCCTAATCGCATCTTTGTAGGAGGAATTGATTTTAAGACAAACGAAAG
TGATTTAAGAAAATTTTTTTCCCAGTATGGGTCTGTGAAAGAAGTGAAGATTGTAAATGACAGAGCTGGA
GTATCCAAAGGGTATGGTTTCGTCACTTTTGAAACACAAGAAGATGCACAAAAAATTTTACAAGAGGCTG
AAAAACTTAATTATAAGGATAAGAAGCTGAACATTGGTCCAGCAATAAGAAAACAACAAGTAGGGATCCC
TCGTTCTAGTATAATGCCAGCAGCTGGAACAATGTATCTAACAACTTCAACTGGATATCCTTATACTTAC
CATAATGGTGTTGCTTATTTTCATACTCCAGAGGTAACTTCGGTCCCACCGCCTTGGCCTTCACGTTCTG
TATGTAGCTCCCCTGTGATGGTAGCTCAGCCCATTTATCAGCAACCTGCATATCACTACCAGGCCACCAC
ACAGTATTTACCAGGACAGTGGCAGTGGAGTGTTCCTCAGCCTTCTGCCTCTTCTGCTCCATTCTTATAC
CTGCAACCTTCTGAGGTTATTTATCAACCAGTGGAAATTGCACAGGATGGTGGATGTGTTCCTCCTCCAC
TGTCTCTGATGGAAACTTCAGTTCCAGAGCCTTATTCTGATCATGGAGTTCAAGCAACATATCACCAGGT
TTATGCTCCAAGTGCCATCACTATGCCTGCGCCTGTGATGCAGCCTGAGCCAATTAAAACAGTGTGGAGC
ATTCATTATTAA

Translation (283 aa):
MQTDSLSPSPNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAG
VSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSSIMPAAGTMYLTTSTGYPYTY
HNGVAYFHTPEVTSVPPPWPSRSVCSSPVMVAQPIYQQPAYHYQATTQYLPGQWQWSVPQPSASSAPFLY
LQPSEVIYQPVEIAQDGGCVPPPLSLMETSVPEPYSDHGVQATYHQVYAPSAITMPAPVMQPEPIKTVWS
IHY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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