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Report for CCDS2437.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2437.1 Public Homo sapiens 2 GLB1L 24 110 108 CCDS HistoryNCBI Gene:79411Re-query CCDS DB by CCDS ID:2437.1Re-query CCDS DB by GeneID:79411See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2437.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295759.12 ENSP00000295759.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000295759.12Link to Ensembl Protein Viewer:ENSP00000295759.7Re-query CCDS DB by Nucleotide ID:ENST00000295759Re-query CCDS DB by Protein ID:ENSP00000295759
Original member Current member EBI ENST00000392089.6 ENSP00000375939.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392089.6Link to Ensembl Protein Viewer:ENSP00000375939.2Re-query CCDS DB by Nucleotide ID:ENST00000392089Re-query CCDS DB by Protein ID:ENSP00000375939
Original member Current member NCBI NM_001286423.2 NP_001273352.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001286423.2Link to Protein Sequence:NP_001273352.1Re-query CCDS DB by Nucleotide ID:NM_001286423Re-query CCDS DB by Protein ID:NP_001273352Link to BLAST:NP_001273352.1
Original member Current member NCBI NM_024506.5 NP_078782.3 Accepted alive Link to Nucleotide Sequence:NM_024506.5Link to Protein Sequence:NP_078782.3Re-query CCDS DB by Nucleotide ID:NM_024506Re-query CCDS DB by Protein ID:NP_078782Link to BLAST:NP_078782.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273352.1 654 Q6UWU2-1 654 100% 0 0
NP_078782.3 654 Q6UWU2-1 654 100% 0 0

Chromosomal Locations for CCDS 2437.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 219237072 219237347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219237512 219237727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219237826 219237957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219238250 219238363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219238495 219238584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219238705 219238779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219239092 219239210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219239411 219239451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219239561 219239682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219239775 219239833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219239920 219240094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219240191 219240285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219242514 219242574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219242768 219242918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219243148 219243314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 219243502 219243573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1965 nt):
ATGGCTCCCAAGAAGCTGTCCTGCCTTCGTTCCCTGCTGCTGCCGCTCAGCCTGACGCTACTGCTGCCCC
AGGCAGACACTCGGTCGTTCGTAGTGGATAGGGGTCATGACCGGTTTCTCCTAGACGGGGCCCCGTTCCG
CTATGTGTCTGGCAGCCTGCACTACTTTCGGGTACCGCGGGTGCTTTGGGCCGACCGGCTTTTGAAGATG
CGATGGAGCGGCCTCAACGCCATACAGTTTTATGTGCCCTGGAACTACCACGAGCCACAGCCTGGGGTCT
ATAACTTTAATGGCAGCCGGGACCTCATTGCCTTTCTGAATGAGGCAGCTCTAGCGAACCTGTTGGTCAT
ACTGAGACCAGGACCTTACATCTGTGCAGAGTGGGAGATGGGGGGTCTCCCATCCTGGTTGCTTCGAAAA
CCTGAAATTCATCTAAGAACCTCAGATCCAGACTTCCTTGCCGCAGTGGACTCCTGGTTCAAGGTCTTGC
TGCCCAAGATATATCCATGGCTTTATCACAATGGGGGCAACATCATTAGCATTCAGGTGGAGAATGAATA
TGGTAGCTACAGAGCCTGTGACTTCAGCTACATGAGGCACTTGGCTGGGCTCTTCCGTGCACTGCTAGGA
GAAAAGATCTTGCTCTTCACCACAGATGGGCCTGAAGGACTCAAGTGTGGCTCCCTCCGGGGACTCTATA
CCACTGTAGATTTTGGCCCAGCTGACAACATGACCAAAATCTTTACCCTGCTTCGGAAGTATGAACCCCA
TGGGCCATTGGTAAACTCTGAGTACTACACAGGCTGGCTGGATTACTGGGGCCAGAATCACTCCACACGG
TCTGTGTCAGCTGTAACCAAAGGACTAGAGAACATGCTCAAGTTGGGAGCCAGTGTGAACATGTACATGT
TCCATGGAGGTACCAACTTTGGATATTGGAATGGTGCCGATAAGAAGGGACGCTTCCTTCCGATTACTAC
CAGCTATGACTATGATGCACCTATATCTGAAGCAGGGGACCCCACACCTAAGCTTTTTGCTCTTCGAGAT
GTCATCAGCAAGTTCCAGGAAGTTCCTTTGGGACCTTTACCTCCCCCGAGCCCCAAGATGATGCTTGGAC
CTGTGACTCTGCACCTGGTTGGGCATTTACTGGCTTTCCTAGACTTGCTTTGCCCCCGTGGGCCCATTCA
TTCAATCTTGCCAATGACCTTTGAGGCTGTCAAGCAGGACCATGGCTTCATGTTGTACCGAACCTATATG
ACCCATACCATTTTTGAGCCAACACCATTCTGGGTGCCAAATAATGGAGTCCATGACCGTGCCTATGTGA
TGGTGGATGGGGTGTTCCAGGGTGTTGTGGAGCGAAATATGAGAGACAAACTATTTTTGACGGGGAAACT
GGGGTCCAAACTGGATATCTTGGTGGAGAACATGGGGAGGCTCAGCTTTGGGTCTAACAGCAGTGACTTC
AAGGGCCTGTTGAAGCCACCAATTCTGGGGCAAACAATCCTTACCCAGTGGATGATGTTCCCTCTGAAAA
TTGATAACCTTGTGAAGTGGTGGTTTCCCCTCCAGTTGCCAAAATGGCCATATCCTCAAGCTCCTTCTGG
CCCCACATTCTACTCCAAAACATTTCCAATTTTAGGCTCAGTTGGGGACACATTTCTATATCTACCTGGA
TGGACCAAGGGCCAAGTCTGGATCAATGGGTTTAACTTGGGCCGGTACTGGACAAAGCAGGGGCCACAAC
AGACCCTCTACGTGCCAAGATTCCTGCTGTTTCCTAGGGGAGCCCTCAACAAAATTACATTGCTGGAACT
AGAAGATGTACCTCTCCAGCCCCAAGTCCAATTTTTGGATAAGCCTATCCTCAATAGCACTAGTACTTTG
CACAGGACACATATCAATTCCCTTTCAGCTGATACACTGAGTGCCTCTGAACCAATGGAGTTAAGTGGGC
ACTGA

Translation (654 aa):
MAPKKLSCLRSLLLPLSLTLLLPQADTRSFVVDRGHDRFLLDGAPFRYVSGSLHYFRVPRVLWADRLLKM
RWSGLNAIQFYVPWNYHEPQPGVYNFNGSRDLIAFLNEAALANLLVILRPGPYICAEWEMGGLPSWLLRK
PEIHLRTSDPDFLAAVDSWFKVLLPKIYPWLYHNGGNIISIQVENEYGSYRACDFSYMRHLAGLFRALLG
EKILLFTTDGPEGLKCGSLRGLYTTVDFGPADNMTKIFTLLRKYEPHGPLVNSEYYTGWLDYWGQNHSTR
SVSAVTKGLENMLKLGASVNMYMFHGGTNFGYWNGADKKGRFLPITTSYDYDAPISEAGDPTPKLFALRD
VISKFQEVPLGPLPPPSPKMMLGPVTLHLVGHLLAFLDLLCPRGPIHSILPMTFEAVKQDHGFMLYRTYM
THTIFEPTPFWVPNNGVHDRAYVMVDGVFQGVVERNMRDKLFLTGKLGSKLDILVENMGRLSFGSNSSDF
KGLLKPPILGQTILTQWMMFPLKIDNLVKWWFPLQLPKWPYPQAPSGPTFYSKTFPILGSVGDTFLYLPG
WTKGQVWINGFNLGRYWTKQGPQQTLYVPRFLLFPRGALNKITLLELEDVPLQPQVQFLDKPILNSTSTL
HRTHINSLSADTLSASEPMELSGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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