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Report for CCDS2593.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2593.1 Public Homo sapiens 3 CRELD1 24 110 108 CCDS HistoryNCBI Gene:78987Re-query CCDS DB by CCDS ID:2593.1Re-query CCDS DB by GeneID:78987See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2593.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000383811.8 ENSP00000373322.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000383811.8Link to Ensembl Protein Viewer:ENSP00000373322.3Re-query CCDS DB by Nucleotide ID:ENST00000383811Re-query CCDS DB by Protein ID:ENSP00000373322
Original member Current member EBI ENST00000452070.6 ENSP00000393643.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000452070.6Link to Ensembl Protein Viewer:ENSP00000393643.2Re-query CCDS DB by Nucleotide ID:ENST00000452070Re-query CCDS DB by Protein ID:ENSP00000393643
Original member Current member EBI ENST00000684493.1 ENSP00000507127.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684493.1Link to Ensembl Protein Viewer:ENSP00000507127.1Re-query CCDS DB by Nucleotide ID:ENST00000684493Re-query CCDS DB by Protein ID:ENSP00000507127
Original member Current member EBI ENST00000682783.1 ENSP00000508358.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682783.1Link to Ensembl Protein Viewer:ENSP00000508358.1Re-query CCDS DB by Nucleotide ID:ENST00000682783Re-query CCDS DB by Protein ID:ENSP00000508358
Original member Current member NCBI NM_001077415.3 NP_001070883.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001077415.3Link to Protein Sequence:NP_001070883.2Re-query CCDS DB by Nucleotide ID:NM_001077415Re-query CCDS DB by Protein ID:NP_001070883Link to BLAST:NP_001070883.2
Original member Current member NCBI NM_001374316.1 NP_001361245.1 Accepted alive Link to Nucleotide Sequence:NM_001374316.1Link to Protein Sequence:NP_001361245.1Re-query CCDS DB by Nucleotide ID:NM_001374316Re-query CCDS DB by Protein ID:NP_001361245Link to BLAST:NP_001361245.1
Original member Current member NCBI NM_015513.6 NP_056328.3 Accepted alive Link to Nucleotide Sequence:NM_015513.6Link to Protein Sequence:NP_056328.3Re-query CCDS DB by Nucleotide ID:NM_015513Re-query CCDS DB by Protein ID:NP_056328Link to BLAST:NP_056328.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001070883.2 420 Q96HD1-1 420 100% 0 0
NP_001361245.1 420 Q96HD1-1 420 100% 0 0
NP_056328.3 420 Q96HD1-1 420 100% 0 0

Chromosomal Locations for CCDS 2593.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 9934439 9934612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9934835 9934917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9937562 9937672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9938015 9938106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9940850 9941026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9941111 9941206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9942813 9942896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9943077 9943172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9943381 9943515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9944365 9944579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1263 nt):
ATGGCCCCATGGCCCCCGAAGGGCCTAGTCCCAGCTATGCTCTGGGGCCTCAGCCTCTTCCTCAACCTCC
CAGGACCTATCTGGCTCCAGCCCTCTCCACCTCCCCAGTCTTCTCCCCCGCCTCAGCCCCATCCGTGTCA
TACCTGCCGGGGACTGGTTGACAGCTTTAACAAGGGCCTGGAGAGAACCATCCGGGACAACTTTGGAGGT
GGAAACACTGCCTGGGAGGAAGAGAATTTGTCCAAATACAAAGACAGTGAGACCCGCCTGGTAGAGGTGC
TGGAGGGTGTGTGCAGCAAGTCAGACTTCGAGTGCCACCGCCTGCTGGAGCTGAGTGAGGAGCTGGTGGA
GAGCTGGTGGTTTCACAAGCAGCAGGAGGCCCCGGACCTCTTCCAGTGGCTGTGCTCAGATTCCCTGAAG
CTCTGCTGCCCCGCAGGCACCTTCGGGCCCTCCTGCCTTCCCTGTCCTGGGGGAACAGAGAGGCCCTGCG
GTGGCTACGGGCAGTGTGAAGGAGAAGGGACACGAGGGGGCAGCGGGCACTGTGACTGCCAAGCCGGCTA
CGGGGGTGAGGCCTGTGGCCAGTGTGGCCTTGGCTACTTTGAGGCAGAACGCAACGCCAGCCATCTGGTA
TGTTCGGCTTGTTTTGGCCCCTGTGCCCGATGCTCAGGACCTGAGGAATCAAACTGTTTGCAATGCAAGA
AGGGCTGGGCCCTGCATCACCTCAAGTGTGTAGACATTGATGAGTGTGGCACAGAGGGAGCCAACTGTGG
AGCTGACCAATTCTGCGTGAACACTGAGGGCTCCTATGAGTGCCGAGACTGTGCCAAGGCCTGCCTAGGC
TGCATGGGGGCAGGGCCAGGTCGCTGTAAGAAGTGTAGCCCTGGCTATCAGCAGGTGGGCTCCAAGTGTC
TCGATGTGGATGAGTGTGAGACAGAGGTGTGTCCGGGAGAGAACAAGCAGTGTGAAAACACCGAGGGCGG
TTATCGCTGCATCTGTGCCGAGGGCTACAAGCAGATGGAAGGCATCTGTGTGAAGGAGCAGATCCCAGAG
TCAGCAGGCTTCTTCTCAGAGATGACAGAAGACGAGTTGGTGGTGCTGCAGCAGATGTTCTTTGGCATCA
TCATCTGTGCACTGGCCACGCTGGCTGCTAAGGGCGACTTGGTGTTCACCGCCATCTTCATTGGGGCTGT
GGCGGCCATGACTGGCTACTGGTTGTCAGAGCGCAGTGACCGTGTGCTGGAGGGCTTCATCAAGGGCAGA
TAA

Translation (420 aa):
MAPWPPKGLVPAMLWGLSLFLNLPGPIWLQPSPPPQSSPPPQPHPCHTCRGLVDSFNKGLERTIRDNFGG
GNTAWEEENLSKYKDSETRLVEVLEGVCSKSDFECHRLLELSEELVESWWFHKQQEAPDLFQWLCSDSLK
LCCPAGTFGPSCLPCPGGTERPCGGYGQCEGEGTRGGSGHCDCQAGYGGEACGQCGLGYFEAERNASHLV
CSACFGPCARCSGPEESNCLQCKKGWALHHLKCVDIDECGTEGANCGADQFCVNTEGSYECRDCAKACLG
CMGAGPGRCKKCSPGYQQVGSKCLDVDECETEVCPGENKQCENTEGGYRCICAEGYKQMEGICVKEQIPE
SAGFFSEMTEDELVVLQQMFFGIIICALATLAAKGDLVFTAIFIGAVAAMTGYWLSERSDRVLEGFIKGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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