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Report for CCDS26682.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26682.1 Public Mus musculus 13 Zfyve16 23 108 98 CCDS HistoryNCBI Gene:218441Re-query CCDS DB by CCDS ID:26682.1Re-query CCDS DB by GeneID:218441See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 26682.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022217.8 ENSMUSP00000022217.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022217.8Link to Ensembl Protein Viewer:ENSMUSP00000022217.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000022217Re-query CCDS DB by Protein ID:ENSMUSP00000022217
Original member Current member NCBI NM_173392.4 NP_775568.1 Accepted alive Link to Nucleotide Sequence:NM_173392.4Link to Protein Sequence:NP_775568.1Re-query CCDS DB by Nucleotide ID:NM_173392Re-query CCDS DB by Protein ID:NP_775568Link to BLAST:NP_775568.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775568.1 1528 Q80U44 1528 100% 0 0

Chromosomal Locations for CCDS 26682.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 92488462 92488623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92492503 92492670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92493858 92493963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92494935 92495097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92500213 92500293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92503939 92504086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92504476 92504580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92505660 92505742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92508122 92508346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92508891 92509046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92510001 92510123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92511478 92511856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92513787 92513929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92516531 92516692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92519467 92519563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92521116 92523331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 92524230 92524299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4587 nt):
ATGGACAGTTACTTTAAAGCAGCTGTCAGTGGCTTGGACAAACTTCTTGATGATTTTGAGCAGAATCCAG
ATAAGCAAGATTATCTCCCAGATGCATATGCTTTTAACCAGTGCTCAGTTTCCTCAGAGTCGGCCTCTCC
ACAGCTAGCTTTACTGTCAAAGGACCAAAGATGCATCAGTACTTGTGCCTCATCAGAAGCATGCTGTGAA
GATGCAAATGAGACTTTTCTTGAAGGAAAGATACACGAGGGCTTAACCTCTAGACCGAATGAAAAAAACG
TAGCGGGACTTGATCTTCTTTCTTCTGTGGATGCGAGTACTTCAGATGAGATCCAGCCTTCCTGTATGAG
ACGGTGTAGTAAGCCTGTCTGTGACCTGATAAGTGACATGGGTAACTTAGTGCATGCCACCAATAGTGAG
GAAGACATTAAGCAGTTATTGCCAGATGACCCTAAGTCTTCTGCAGATACTTTGATCACATTGGACTCGT
CTTCAGTTTCAGAGGCTCTCACTGTCTCTTCAGTAGACTGTGGTAGTAATGCTGTCAGAGAAGAGCAGAA
TAACATCAACGCTGGTATAAAAAACAGAGATATTAGTATCAAAGAATTGGGTGTAAAAGTAGACATGGCA
CTTTTTGATTCTTGTAAATATAATAGAACAGAAAATTTAAAGGATAAAATTATTTCTAATGAGTTAGAAA
CAGTTGATTTTGACATGCCATCTGTTTTGATGGAACAAAGTTCTGAAATGTCTAATACCAAAGATAACCC
ACAATACAAGAGGCTGCCATGTGAATTGTTAAAAGATGATGGCTGTTTGGCAGAAGAGAAAGTAGCTGTG
GCAGTCAATAATACAGAGTGTTTAGAAGAAGGAGGAGGAAGTAACACAATTGCTATGCCTTGCAAGCTTC
CAGAAAATGAAGGGATATCCCCAAGTGACCCAGCTTCAAAAGATGAAAATTTCAAGTTACCTGACTTTCC
CCTCCAGGAAAATAGAACTTCTGTGTTCATGAAACAGACTGTAAAAGAAGACTCAAGAAATTTAGACCTT
AAAGATAATAATGATATAGTCCATGTTTCAGGTGATGATGTGCCCCCTTCACTGTCCTGTCTTTCATTGT
CTGGGTCTTTGTGTGGATCGTTAATTCACAATAATGAACACAGTGATATTTTACCTCCTAATGAGTCTGA
AGGCCAGAACAATGATGCAGTGACTATACATGAAGAGATACAGAAGAGTGATGTTTTAGATGGGGAGACA
GATCTTTCAAAGAAGGAAACGTGTAGGAGCATATTTCTTCAGCCAGTAAATGAAAAGAAAGGGGAGGGAA
AGGTTGAGGTTGAGGAGATGGTAATCAGTGGTGAGTCTTTGGAGTCCCCTGAGGACGCCAGCTCTGCTGC
AGCAGCTGGGTCTCCGGTGGCACTTTCTGCTGCAAGTGTCCCAGAGGCTCCTGGTCCATGTGAAGGTCTC
ACTTTTCCCAGCAGTGATATGGATGGGCAAGAGTTAGATTACTTTAATATTGATGAAAGCATGAGAAGTG
GCATACTAATTAGCGATGCTGAACTCGATGCTTTTCTGAAGGAACAGTGTCTTTCGAACTCTAACACAAT
GTCTGCTGGAGAAAATGTAAATGATTCCCAGTTGCAGATGAATCAGATCACTATGAAAGGACTACATGAT
GAAAATGCTGGGGATATATACTTCAATGCTGAAGCAGGAGCTGCTGGAGAAAATGGAGGTGTTGGCAACT
GTGAAACAAGTGATAAAGAAAACACAGAAAATAATGGTCTTTCCATAGGAGAAAAAGGCGCAATTCCAAC
TGAAAGAGAGTTATCTGCCTGTCAGCCTGACATAAGGGATGAATTGCCAGTCCCCAGTATTAAAACCCAA
GCTGTTGGAGGGGCTCGACCTAAGCAGCTGCTGAGTCTTCCACCAGGAACAAGGAGTTCAAAGGAACTGA
ATAAGCCAGATGTTGTGGATGTGCCAGAAAGTGAGCCATGCACAGCAAATGCTACTGCTGTATCCACTTG
CTCTGCAGATCATATACCTGATTCTCAGGTTAGCTTCAACTCCAATTACATTGACATAGAAAGTAATTTT
GAAGATGGATCCAGTTTTGTAACTGCAAACAAGGATTCTCTGCCTGAAAATAAGCGCAAAGAAAGCTTGG
TTTTGGGCCAGAAACAACCTACATGGGTTCCTGATTCAGAAGCTCCAAACTGTATGAACTGCCAAGTCAA
ATTCACCTTTACAAAACGGCGACACCACTGCCGAGCATGTGGGAAGGTATTTTGTGGTGTCTGTTGTAAC
AGGAAATGTAAGCTTCAGTATCTAGAGAAGGAAGCAAGAGTATGTGTAATCTGCTATGAGACTATAAATA
AAGCTCAGGCATTTGAAAGGATGATGAGTCCAGGTGGTTCTTGTCTTAAGTCTAATCATTCTAATGAATG
TGCCACTGATCAGCCACTTCAGGAGACCCAAACATCCAGTACACCTTCACCTACAACTTTGCCCATCTCA
GCACTGAAACAACCAAATGTTGAAGGACCATGTTCCAAAGAACAGAAGAGAGTATGGTTTGCAGATGGCA
TACTGCCGAATGGTGAAGTTGCAGATACTACGAAATTATCATCTGGAAGTAAAAGATGTTCTGATGACTT
TAGTCCTGTCTTACCTGATGTGCCCACAATGATAAATAAAGTGGATCGTACCCATTCTCCTACAGTGGAA
AAACCAAACAATGGTTTAGGAGACATTATAAGAAGTGAGATAAGCCAGAGTCCAACTTGTCATACTGCAC
CTGTGGAAAGACTGCCGGGGAACACAGGCACGGAAGGCTTGCCCATGCCTGGCCCTTTCACACTAGAAGA
TGATGTTTTTGTGGACAGCGAGGAGCCGTCTACTCCTACTGTTGTCCCTGCTAATAGTGGTTTGCCTGTT
GCTAGCATTTCAGACTACAGGTTATTGTGTAGTGTTGCCAAATGTGTCTGCAACAACATTAGTCTTCTAC
CAGACGATGACATTGGTTTGCCTCCCCTTCTGGCCACATCTGGAGAAGATGGATCAGTGCCTGTTGTGCA
AGAACGTCCCTCTCATGAGCAGATCATTTTACTTCTTGAAGGGGAAGGATTTCCTCCTGCTACATTTGTT
CTAAATGCAAACCTCCTTGTGAATGTCAAGTTGGTGCTTTATTCCTCAGAGAAGTATTGGTACTTCTCAA
CCAATGGATTGCATGGCTTGGGACAGGCAGAAATTATTGTCCTGTTGCAATGTTTGCCAAATGAGGATAC
GGTTCCTAAGGACATCTTCAGACTGTTCATCACCATATATAAGGATGCTTTAAAAGGAAAATACATAGAA
AATTTGGACAATCTGACCTTTACTGAGAGTTTTCTCAACAGCAAGGATCATGGAGGGTTCCTGTTTATTA
CACCTACCTTCCAGAACCTTGATGGTCTCCCCGTGCCAAGGAGTCCTTTTCTCTGCGGCATTCTTATCCA
GAAGCTGGAGATTCCCTGGGCAAAGGTTTTTCCTATGCGGCTAATGTTGCGATTGGGAGCAGAATACAAA
GCATACCCTGCTCCTCTAACAAGTGTCAGAGGCAGGAAACCTCTTTTTGGAGAAATAGGACATACTATTA
TGAACTTACTTGTTGATCTTCGAAATTACCAGTATACATTGCATAACATCGATCAGCTATTGATTCATAT
GGAAATGGGAAAAAGCTGTATAAAAATACCTCGAAAAAAGTACAGTGATGTAATGAAGGTAATACATTCC
TCTAACGAGCACGTCATCAGTATTGGAGCTAGTTTTAGTACAGAAGCAGATTCTCATCTGGTCTGTGTAC
AGAGTGATGGAGTTTATCAGACTCAGGCCAACAGTGCCACTGGTCAGCCAAGGAAAGTGACAGGTGCAAG
TTTTGTGGTGTTTAATGGTGCTCTGAAAACATCTTCAGGATTTCTTGCCAAATCCAGCATAGTCGAAGAT
GGCTTAATGGTACAAATAACTCCAGAGACCATGGAGGGCTTGCGGCTGGCTTTACGAGAGCAAAAGGACT
TTAGAATCCAGTGTGGAAAAGTTGATGCGGTAGACCTGAGAGAGTATGTGGACATCTGTTGGGTGGATTC
AGAAGAGAGGAAGAACAAAGGTGTTATCAGTTCAGTAGATGGAATGTCAGTGGAAGGATTTCCAAGTGAA
AAAATAAAACTGGAAACAGATTTTGAAACTGAGGAGAAGACTGTGAAATGCACTGAGGTGTTCTACTTCC
TAAAGGACCAAGATATATCTATTTTATCAAGTAGTTACCAGTTTGCAAAGGAGATTGCTGTGGCTTGTAG
TGCTGCCCTGTGCCCTCACCTGAGAACTCTAAAGAGTAACAGAATGAACAAAATTGGACTCAGAGTGTCC
ATTGACACTGATATGGTTGAGTTCCAGGCAGGCTGTGAAGGCCAGCTTCTGCCTCAGCATTACCTGAATG
ATCTGGATAGTGCCCTGATCCCTGTGATCCACGGCGGGACCTCCAACTCTAGTCTGCCACTAGAAATAGA
GTTAGCATTTTTCATTCTAGAAAACCTTTCTGAGTGA

Translation (1528 aa):
MDSYFKAAVSGLDKLLDDFEQNPDKQDYLPDAYAFNQCSVSSESASPQLALLSKDQRCISTCASSEACCE
DANETFLEGKIHEGLTSRPNEKNVAGLDLLSSVDASTSDEIQPSCMRRCSKPVCDLISDMGNLVHATNSE
EDIKQLLPDDPKSSADTLITLDSSSVSEALTVSSVDCGSNAVREEQNNINAGIKNRDISIKELGVKVDMA
LFDSCKYNRTENLKDKIISNELETVDFDMPSVLMEQSSEMSNTKDNPQYKRLPCELLKDDGCLAEEKVAV
AVNNTECLEEGGGSNTIAMPCKLPENEGISPSDPASKDENFKLPDFPLQENRTSVFMKQTVKEDSRNLDL
KDNNDIVHVSGDDVPPSLSCLSLSGSLCGSLIHNNEHSDILPPNESEGQNNDAVTIHEEIQKSDVLDGET
DLSKKETCRSIFLQPVNEKKGEGKVEVEEMVISGESLESPEDASSAAAAGSPVALSAASVPEAPGPCEGL
TFPSSDMDGQELDYFNIDESMRSGILISDAELDAFLKEQCLSNSNTMSAGENVNDSQLQMNQITMKGLHD
ENAGDIYFNAEAGAAGENGGVGNCETSDKENTENNGLSIGEKGAIPTERELSACQPDIRDELPVPSIKTQ
AVGGARPKQLLSLPPGTRSSKELNKPDVVDVPESEPCTANATAVSTCSADHIPDSQVSFNSNYIDIESNF
EDGSSFVTANKDSLPENKRKESLVLGQKQPTWVPDSEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCN
RKCKLQYLEKEARVCVICYETINKAQAFERMMSPGGSCLKSNHSNECATDQPLQETQTSSTPSPTTLPIS
ALKQPNVEGPCSKEQKRVWFADGILPNGEVADTTKLSSGSKRCSDDFSPVLPDVPTMINKVDRTHSPTVE
KPNNGLGDIIRSEISQSPTCHTAPVERLPGNTGTEGLPMPGPFTLEDDVFVDSEEPSTPTVVPANSGLPV
ASISDYRLLCSVAKCVCNNISLLPDDDIGLPPLLATSGEDGSVPVVQERPSHEQIILLLEGEGFPPATFV
LNANLLVNVKLVLYSSEKYWYFSTNGLHGLGQAEIIVLLQCLPNEDTVPKDIFRLFITIYKDALKGKYIE
NLDNLTFTESFLNSKDHGGFLFITPTFQNLDGLPVPRSPFLCGILIQKLEIPWAKVFPMRLMLRLGAEYK
AYPAPLTSVRGRKPLFGEIGHTIMNLLVDLRNYQYTLHNIDQLLIHMEMGKSCIKIPRKKYSDVMKVIHS
SNEHVISIGASFSTEADSHLVCVQSDGVYQTQANSATGQPRKVTGASFVVFNGALKTSSGFLAKSSIVED
GLMVQITPETMEGLRLALREQKDFRIQCGKVDAVDLREYVDICWVDSEERKNKGVISSVDGMSVEGFPSE
KIKLETDFETEEKTVKCTEVFYFLKDQDISILSSSYQFAKEIAVACSAALCPHLRTLKSNRMNKIGLRVS
IDTDMVEFQAGCEGQLLPQHYLNDLDSALIPVIHGGTSNSSLPLEIELAFFILENLSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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