NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS2688.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2688.1 Public Homo sapiens 3 MOBP 24 110 108 CCDS HistoryNCBI Gene:4336Re-query CCDS DB by CCDS ID:2688.1Re-query CCDS DB by GeneID:4336See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 2688.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000441980.6 ENSP00000388827.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000441980.6Link to Ensembl Protein Viewer:ENSP00000388827.2Re-query CCDS DB by Nucleotide ID:ENST00000441980Re-query CCDS DB by Protein ID:ENSP00000388827
Original member Current member EBI ENST00000424090.5 ENSP00000389055.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000424090.5Link to Ensembl Protein Viewer:ENSP00000389055.1Re-query CCDS DB by Nucleotide ID:ENST00000424090Re-query CCDS DB by Protein ID:ENSP00000389055
Original member Current member EBI ENST00000420739.5 ENSP00000400491.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000420739.5Link to Ensembl Protein Viewer:ENSP00000400491.1Re-query CCDS DB by Nucleotide ID:ENST00000420739Re-query CCDS DB by Protein ID:ENSP00000400491
Original member Current member EBI ENST00000682069.1 ENSP00000506926.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682069.1Link to Ensembl Protein Viewer:ENSP00000506926.1Re-query CCDS DB by Nucleotide ID:ENST00000682069Re-query CCDS DB by Protein ID:ENSP00000506926
Original member Current member EBI ENST00000684792.1 ENSP00000508923.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000684792.1Link to Ensembl Protein Viewer:ENSP00000508923.1Re-query CCDS DB by Nucleotide ID:ENST00000684792Re-query CCDS DB by Protein ID:ENSP00000508923
Original member Current member NCBI NM_001278323.2 NP_001265252.1 Accepted alive Link to Nucleotide Sequence:NM_001278323.2Link to Protein Sequence:NP_001265252.1Re-query CCDS DB by Nucleotide ID:NM_001278323Re-query CCDS DB by Protein ID:NP_001265252Link to BLAST:NP_001265252.1
Original member Current member NCBI NM_001393704.1 NP_001380633.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001393704.1Link to Protein Sequence:NP_001380633.1Re-query CCDS DB by Nucleotide ID:NM_001393704Re-query CCDS DB by Protein ID:NP_001380633Link to BLAST:NP_001380633.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265252.1 183 Q13875-1 183 100% 0 0
NP_001380633.1 183 Q13875-1 183 100% 0 0

Chromosomal Locations for CCDS 2688.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 39502070 39502275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 39502535 39502880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (552 nt):
ATGAGTCAGAAACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACACTTCAGCA
TACACTGCTGCCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGATAGTGGATCGGAAATACAGCATCTG
TAAGAGCGGCTGCTTCTACCAGAAGAAAGAGGAGGACTGGATCTGCTGCGCCTGCCAGAAGACCAGAACC
AGCCGCCGTGCCAAGTCCCCTCAGAGGCCCAAGCAACAGCCAGCTGCGCCCCCCGCGGTGGTCAGAGCGC
CAGCCAAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCC
ACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGTCCCCGC
CCAGAGGTCCGACCACCGCCAGCCAAGCAGCGTCCCCCTCAGAAGTCCAAGCAACAGCCGCGCAGCAGCC
CCCTCAGAGGGCCAGGCGCCAGCCGTGGGGGGTCCCCCGTCAAAGCTTCTAGGTTCTGGTAA

Translation (183 aa):
MSQKPAKEGPRLSKNQKYSEHFSIHCCPPFTFLNSKKEIVDRKYSICKSGCFYQKKEEDWICCACQKTRT
SRRAKSPQRPKQQPAAPPAVVRAPAKPRSPPRSERQPRSPPRSERQPRSPPRSERQPRSPPRSERQPRPR
PEVRPPPAKQRPPQKSKQQPRSSPLRGPGASRGGSPVKASRFW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH