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Report for CCDS27759.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27759.1 Public Mus musculus 15 Cpne8 23 108 98 CCDS HistoryNCBI Gene:66871Re-query CCDS DB by CCDS ID:27759.1Re-query CCDS DB by GeneID:66871See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27759.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000014777.8 ENSMUSP00000014777.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000014777.8Link to Ensembl Protein Viewer:ENSMUSP00000014777.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000014777Re-query CCDS DB by Protein ID:ENSMUSP00000014777
Original member Current member NCBI NM_001033851.1 NP_001029023.1 Accepted alive Link to Nucleotide Sequence:NM_001033851.1Link to Protein Sequence:NP_001029023.1Re-query CCDS DB by Nucleotide ID:NM_001033851Re-query CCDS DB by Protein ID:NP_001029023Link to BLAST:NP_001029023.1

Chromosomal Locations for CCDS 27759.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 90643624 90643713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90648578 90648624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90649243 90649283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 90679168 90679304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (315 nt):
ATGTGGGCTCGGGACAAGTGCTCCGTTCCTCAGCTCGAGATGGACAGCCGCTACACCAGCGCCACGGGCA
TCGGGGACTTGAACCAGCTGAGTGCGGCCATCCCCGCCACACGAGTGGAGGTGTCAGTGTCCTGCAGAAA
TCTCCTTGATAGAGATACATTTTCTAAGTCGGATCCAATTTGTGTCCTATATACACAAGCAGTTGGGAAT
AAAGAATGGAGAGAGGAGGCTGCTCCCCTGGAAGAGCCATTACATCGTTGGGAGAACAGCACACAGTATT
ACCTCGTCAGAGCCCTCCACTCAGCCCTGCTGTAG

Translation (104 aa):
MWARDKCSVPQLEMDSRYTSATGIGDLNQLSAAIPATRVEVSVSCRNLLDRDTFSKSDPICVLYTQAVGN
KEWREEAAPLEEPLHRWENSTQYYLVRALHSALL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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