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Report for CCDS2785.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2785.1 Public Homo sapiens 3 NDUFAF3 24 110 108 CCDS HistoryNCBI Gene:25915Re-query CCDS DB by CCDS ID:2785.1Re-query CCDS DB by GeneID:25915See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2785.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000326912.8 ENSP00000323003.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000326912.8Link to Ensembl Protein Viewer:ENSP00000323003.4Re-query CCDS DB by Nucleotide ID:ENST00000326912Re-query CCDS DB by Protein ID:ENSP00000323003
Original member Current member EBI ENST00000395458.6 ENSP00000378843.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395458.6Link to Ensembl Protein Viewer:ENSP00000378843.2Re-query CCDS DB by Nucleotide ID:ENST00000395458Re-query CCDS DB by Protein ID:ENSP00000378843
Original member Current member EBI ENST00000451378.2 ENSP00000402465.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000451378.2Link to Ensembl Protein Viewer:ENSP00000402465.2Re-query CCDS DB by Nucleotide ID:ENST00000451378Re-query CCDS DB by Protein ID:ENSP00000402465
Original member Current member NCBI NM_199070.2 NP_951033.1 Accepted alive Link to Nucleotide Sequence:NM_199070.2Link to Protein Sequence:NP_951033.1Re-query CCDS DB by Nucleotide ID:NM_199070Re-query CCDS DB by Protein ID:NP_951033Link to BLAST:NP_951033.1
Original member Current member NCBI NM_199073.2 NP_951047.1 Accepted alive Link to Nucleotide Sequence:NM_199073.2Link to Protein Sequence:NP_951047.1Re-query CCDS DB by Nucleotide ID:NM_199073Re-query CCDS DB by Protein ID:NP_951047Link to BLAST:NP_951047.1
Original member Current member NCBI NM_199074.2 NP_951056.1 Accepted alive Link to Nucleotide Sequence:NM_199074.2Link to Protein Sequence:NP_951056.1Re-query CCDS DB by Nucleotide ID:NM_199074Re-query CCDS DB by Protein ID:NP_951056Link to BLAST:NP_951056.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_951033.1 127 Q9BU61-2 127 100% 0 0
NP_951047.1 127 Q9BU61-2 127 100% 0 0
NP_951056.1 127 Q9BU61-2 127 100% 0 0

Chromosomal Locations for CCDS 2785.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 49022440 49022538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49022702 49022768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49022876 49022976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49023056 49023172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (384 nt):
ATGTACATCGACAGCTACAACAGCCGCGGCTTCATGATAAACGGAAACCGCGTGCTCGGCCCCTGCGCTC
TGCTCCCGCACTCGGTGGTGCAGTGGAACGTGGGATCCCACCAGGACATCACCGAAGACAGCTTTTCCCT
CTTCTGGTTGCTGGAGCCCCGGATAGAGATCGTGGTGGTGGGGACTGGAGACCGGACCGAGAGGCTGCAG
TCCCAGGTGCTTCAAGCCATGAGGCAGCGGGGCATTGCTGTGGAAGTGCAGGACACGCCCAATGCCTGTG
CCACCTTCAACTTCCTGTGTCATGAAGGCCGAGTAACTGGAGCTGCTCTCATCCCTCCACCAGGAGGGAC
TTCACTTACATCTTTGGGCCAAGCTGCTCAATGA

Translation (127 aa):
MYIDSYNSRGFMINGNRVLGPCALLPHSVVQWNVGSHQDITEDSFSLFWLLEPRIEIVVVGTGDRTERLQ
SQVLQAMRQRGIAVEVQDTPNACATFNFLCHEGRVTGAALIPPPGGTSLTSLGQAAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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