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Report for CCDS2791.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2791.1 Public Homo sapiens 3 KLHDC8B 24 110 108 CCDS HistoryNCBI Gene:200942Re-query CCDS DB by CCDS ID:2791.1Re-query CCDS DB by GeneID:200942See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2791.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332780.4 ENSP00000327468.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332780.4Link to Ensembl Protein Viewer:ENSP00000327468.2Re-query CCDS DB by Nucleotide ID:ENST00000332780Re-query CCDS DB by Protein ID:ENSP00000327468
Original member Current member NCBI NM_173546.3 NP_775817.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173546.3Link to Protein Sequence:NP_775817.1Re-query CCDS DB by Nucleotide ID:NM_173546Re-query CCDS DB by Protein ID:NP_775817Link to BLAST:NP_775817.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775817.1 354 Q8IXV7 354 100% 0 0

Chromosomal Locations for CCDS 2791.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 49172770 49173145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49174239 49174403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49174742 49174966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49175062 49175163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49175605 49175801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1065 nt):
ATGTCTGCAGGAGGTGGCCGGGCCTTTGCTTGGCAAGTGTTCCCCCCCATGCCCACTTGCCGGGTCTATG
GCACAGTGGCACACCAAGATGGGCACCTGCTGGTGTTGGGGGGTTGTGGCCGGGCTGGACTGCCCCTGGA
CACTGCTGAGACACTGGACATGGCCTCGCACACATGGCTGGCACTGGCACCCCTGCCCACTGCCCGGGCT
GGTGCAGCTGCGGTAGTTCTGGGCAAGCAGGTGCTAGTGGTGGGTGGTGTGGATGAGGTCCAGAGCCCGG
TAGCTGCTGTAGAGGCCTTCCTGATGGATGAGGGCCGCTGGGAGCGTCGGGCCACCCTCCCTCAAGCAGC
CATGGGGGTTGCAACTGTGGAGAGAGATGGTATGGTGTATGCTCTGGGGGGAATGGGCCCTGACACGGCC
CCCCAGGCCCAGGTACGTGTGTATGAGCCCCGTCGGGACTGCTGGCTTTCGCTACCCTCCATGCCCACAC
CCTGCTATGGGGCCTCCACCTTCCTGCACGGGAACAAGATCTATGTCCTGGGGGGCCGCCAGGGCAAGCT
CCCGGTGACTGCTTTTGAAGCCTTTGATCTGGAGGCCCGTACATGGACCCGGCATCCAAGCCTACCCAGC
CGTCGGGCCTTTGCTGGCTGCGCCATGGCTGAAGGCAGCGTCTTTAGCCTGGGTGGCCTGCAGCAGCCTG
GGCCCCACAACTTCTACTCTCGCCCACACTTTGTCAACACTGTGGAGATGTTTGACCTGGAGCATGGGTC
CTGGACCAAATTGCCCCGCAGCCTGCGCATGAGGGATAAGAGGGCAGACTTTGTGGTTGGGTCCCTTGGG
GGCCACATTGTGGCCATTGGGGGCCTTGGAAACCAGCCATGTCCTTTGGGCTCTGTGGAGAGCTTTAGCC
TTGCACGGCGGCGCTGGGAGGCATTGCCTGCCATGCCCACTGCCCGCTGCTCCTGCTCTAGTCTGCAGGC
TGGGCCCCGGCTGTTTGTTATTGGGGGTGTGGCCCAGGGCCCCAGTCAAGCCGTGGAGGCACTGTGTCTG
CGTGATGGGGTCTGA

Translation (354 aa):
MSAGGGRAFAWQVFPPMPTCRVYGTVAHQDGHLLVLGGCGRAGLPLDTAETLDMASHTWLALAPLPTARA
GAAAVVLGKQVLVVGGVDEVQSPVAAVEAFLMDEGRWERRATLPQAAMGVATVERDGMVYALGGMGPDTA
PQAQVRVYEPRRDCWLSLPSMPTPCYGASTFLHGNKIYVLGGRQGKLPVTAFEAFDLEARTWTRHPSLPS
RRAFAGCAMAEGSVFSLGGLQQPGPHNFYSRPHFVNTVEMFDLEHGSWTKLPRSLRMRDKRADFVVGSLG
GHIVAIGGLGNQPCPLGSVESFSLARRRWEALPAMPTARCSCSSLQAGPRLFVIGGVAQGPSQAVEALCL
RDGV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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