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Report for CCDS2808.3 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2808.3 Public Homo sapiens 3 MON1A 24 110 108 CCDS HistoryNCBI Gene:84315Re-query CCDS DB by CCDS ID:2808.3Re-query CCDS DB by GeneID:84315See the combined annotation on chromosome 3 in Sequence Viewer

Public Note for CCDS 2808.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 2808.3

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296473.8 ENSP00000296473.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000296473.8Link to Ensembl Protein Viewer:ENSP00000296473.4Re-query CCDS DB by Nucleotide ID:ENST00000296473Re-query CCDS DB by Protein ID:ENSP00000296473
Original member Current member EBI ENST00000417270.2 ENSP00000399613.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000417270.2Link to Ensembl Protein Viewer:ENSP00000399613.2Re-query CCDS DB by Nucleotide ID:ENST00000417270Re-query CCDS DB by Protein ID:ENSP00000399613
Original member Current member EBI ENST00000642691.1 ENSP00000494294.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000642691.1Link to Ensembl Protein Viewer:ENSP00000494294.1Re-query CCDS DB by Nucleotide ID:ENST00000642691Re-query CCDS DB by Protein ID:ENSP00000494294
Original member Current member EBI ENST00000645862.1 ENSP00000494452.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645862.1Link to Ensembl Protein Viewer:ENSP00000494452.1Re-query CCDS DB by Nucleotide ID:ENST00000645862Re-query CCDS DB by Protein ID:ENSP00000494452
Original member Current member NCBI NM_032355.4 NP_115731.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032355.4Link to Protein Sequence:NP_115731.3Re-query CCDS DB by Nucleotide ID:NM_032355Re-query CCDS DB by Protein ID:NP_115731Link to BLAST:NP_115731.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115731.3 555 Q86VX9-5 555 100% 0 0

Chromosomal Locations for CCDS 2808.3

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 49909014 49909154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49909253 49909400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49910119 49910884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49911526 49912011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49913220 49913346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1668 nt):
ATGGCTACTGACATGCAGAGGAAGAGAAGCAGCGAATGCCTTGATGGCACATTGACTCCTTCTGATGGAC
AGAGTATGGAGAGAGCTGAGAGCCCCACACCAGGAATGGCCCAGGGAATGGAGCCAGGTGCGGGCCAGGA
GGGTGCCATGTTCGTCCATGCCCGTTCCTACGAGGACCTGACTGAGTCAGAGGATGGGGCAGCTTCTGGG
GACAGCCACAAGGAGGGTACCAGGGGTCCCCCGCCGCTGCCTACAGACATGCGCCAGATCAGCCAGGACT
TTAGCGAGCTAAGCACCCAGCTGACGGGTGTGGCCCGGGACCTGCAGGAGGAGATGCTGCCAGGAAGCTC
TGAGGATTGGCTGGAACCCCCAGGGGCAGTTGGGCGACCAGCCACAGAGCCCCCCAGGGAGGGCACAACC
GAGGGGGATGAGGAGGATGCCACGGAGGCATGGCGCCTGCACCAGAAGCATGTCTTTGTGCTGAGTGAGG
CAGGGAAGCCTGTGTACTCCCGCTATGGGTCTGAGGAGGCACTTTCCAGCACTATGGGTGTTATGGTGGC
CCTGGTGTCCTTCCTGGAGGCAGACAAGAACGCCATCCGCTCCATCCATGCAGATGGCTACAAGGTAGTA
TTCGTGCGCCGGAGCCCGCTGGTGCTAGTGGCGGTGGCTCGTACGCGGCAGTCGGCACAAGAGCTGGCGC
AGGAGCTGCTCTACATCTACTACCAGATCCTAAGCCTTCTTACCGGTGCGCAGCTGAGCCACATCTTCCA
GCAGAAGCAGAACTATGATTTGCGGCGCCTACTCTCGGGCTCAGAGCGCATCACCGACAACCTGCTGCAG
CTCATGGCACGAGACCCCAGCTTCCTGATGGGGGCGGCACGGTGCCTGCCCCTGGCGGCGGCCGTGCGCG
ACACTGTGAGCGCCAGCCTGCAGCAGGCGCGTGCGCGCAGCCTGGTCTTCTCCATCCTGCTGGCCCGCAA
CCAGCTCGTGGCACTCGTGCGCCGAAAGGACCAATTTCTGCACCCCATCGACCTGCACCTGCTCTTCAAC
CTCATTAGTTCCTCCTCGTCCTTTCGCGAGGGCGAGGCCTGGACGCCCGTGTGCCTGCCCAAATTCAACG
CAGCCGGCTTCTTCCACGCACACATCTCTTACCTAGAGCCTGACACTGACCTCTGCCTGCTGCTTGTCTC
CACTGACCGTGAGGACTTCTTTGCAGTCTCTGACTGCCGCCGCCGCTTCCAGGAGCGCCTTCGCAAGCGC
GGAGCCCACCTGGCCCTGCGAGAGGCACTGCGCACACCCTACTACAGCGTTGCCCAAGTGGGCATCCCTG
ACCTGCGTCACTTCCTCTATAAGTCAAAGAGCTCGGGACTCTTCACCAGCCCTGAGATTGAGGCCCCATA
CACCAGTGAAGAGGAGCAGGAGCGGCTGCTGGGCCTCTACCAGTACTTGCACAGTCGTGCCCACAATGCC
TCTCGCCCACTCAAGACCATTTACTACACGGGCCCCAACGAGAACCTCCTGGCCTGGGTGACAGGCGCCT
TTGAGCTCTACATGTGTTACAGCCCCCTGGGGACCAAGGCGTCAGCCGTCAGTGCCATCCATAAGCTGAT
GCGCTGGATCCGCAAAGAGGAAGACCGCCTCTTCATTCTCACGCCCCTCACCTATTGA

Translation (555 aa):
MATDMQRKRSSECLDGTLTPSDGQSMERAESPTPGMAQGMEPGAGQEGAMFVHARSYEDLTESEDGAASG
DSHKEGTRGPPPLPTDMRQISQDFSELSTQLTGVARDLQEEMLPGSSEDWLEPPGAVGRPATEPPREGTT
EGDEEDATEAWRLHQKHVFVLSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHADGYKVV
FVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQKQNYDLRRLLSGSERITDNLLQ
LMARDPSFLMGAARCLPLAAAVRDTVSASLQQARARSLVFSILLARNQLVALVRRKDQFLHPIDLHLLFN
LISSSSSFREGEAWTPVCLPKFNAAGFFHAHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKR
GAHLALREALRTPYYSVAQVGIPDLRHFLYKSKSSGLFTSPEIEAPYTSEEEQERLLGLYQYLHSRAHNA
SRPLKTIYYTGPNENLLAWVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEEDRLFILTPLTY


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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