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Report for CCDS28536.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28536.1 Public Mus musculus 17 Mettl26 23 108 98 CCDS HistoryNCBI Gene:68347Re-query CCDS DB by CCDS ID:28536.1Re-query CCDS DB by GeneID:68347See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28536.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026827.15 ENSMUSP00000026827.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026827.15Link to Ensembl Protein Viewer:ENSMUSP00000026827.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000026827Re-query CCDS DB by Protein ID:ENSMUSP00000026827
Original member Current member NCBI NM_026686.2 NP_080962.1 Accepted alive Link to Nucleotide Sequence:NM_026686.2Link to Protein Sequence:NP_080962.1Re-query CCDS DB by Nucleotide ID:NM_026686Re-query CCDS DB by Protein ID:NP_080962Link to BLAST:NP_080962.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080962.1 204 Q9DCS2 204 100% 0 0

Chromosomal Locations for CCDS 28536.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 25875530 25875726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25875960 25876122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25876220 25876279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25876495 25876562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25876661 25876739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25876950 25876997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (615 nt):
ATGATGATGGCTGCGGCTGCTGAGAGAAACAAGGAGCCCATCCTGTCCGTACTCCGCCAGTATGTGGATC
CTGCCCAGCGCTGTGTTCGCGTGCTCGAGGTGGCCTCGGGCTCTGGACAGCACGCGGCACACTTTGCACA
GGCCTTCCCGAATGCCGAGTGGCAGCCGTCGGACGTGGACCAACGCTGCCTGGACAGCATTGCCGCCACC
ACCCGAGCCCAAGGGTTGTCCAATGTGAAGGCTCCGCTGTACCTGGACGTGACCTGGGAGTGGGAGCAAT
GGGGCGGCATCCCACCCCGATCGCTGGACCTGTTGCTCTGCATCAATATGATCCACATCAGCCCCCTGAA
CTGCACAGAGGGGCTCTTTAGAGCAGCAGGACACCTGCTCAAAACCAAGGCTGTGCTGATCACCTACGGG
CCCTATGCCGTCAATGGGAAGATCTCTCCCCAGAGCAACGTGGACTTTGACCTGACCCTCAGATGCAGGA
ACCCAGAGTGGGGGCTTCGTGACACAGTCCTTCTGGAGGAACTAGGCCAGGCCAGTGGCTTGGTCCTGGA
GAGGATGGTGGACATGCCAGCCAACAACAAGTGCCTGATTTTTCGGAAAGAATAG

Translation (204 aa):
MMMAAAAERNKEPILSVLRQYVDPAQRCVRVLEVASGSGQHAAHFAQAFPNAEWQPSDVDQRCLDSIAAT
TRAQGLSNVKAPLYLDVTWEWEQWGGIPPRSLDLLLCINMIHISPLNCTEGLFRAAGHLLKTKAVLITYG
PYAVNGKISPQSNVDFDLTLRCRNPEWGLRDTVLLEELGQASGLVLERMVDMPANNKCLIFRKE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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