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Report for CCDS2864.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2864.1 Public Homo sapiens 3 ITIH1 24 110 108 CCDS HistoryNCBI Gene:3697Re-query CCDS DB by CCDS ID:2864.1Re-query CCDS DB by GeneID:3697See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2864.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000273283.7 ENSP00000273283.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000273283.7Link to Ensembl Protein Viewer:ENSP00000273283.2Re-query CCDS DB by Nucleotide ID:ENST00000273283Re-query CCDS DB by Protein ID:ENSP00000273283
Original member Current member NCBI NM_002215.4 NP_002206.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002215.4Link to Protein Sequence:NP_002206.2Re-query CCDS DB by Nucleotide ID:NM_002215Re-query CCDS DB by Protein ID:NP_002206Link to BLAST:NP_002206.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002206.2 911 P19827-1 911 100% 0 0

Chromosomal Locations for CCDS 2864.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 52777616 52777732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52777997 52778017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52778340 52778506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52778942 52779046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52779432 52779594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52780269 52780382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52781940 52782065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52782151 52782267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52782957 52783125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52783214 52783339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52784296 52784477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52785044 52785229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52786295 52786434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52786945 52787099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52787188 52787202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52787592 52787612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52787986 52788066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52788232 52788345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52789653 52789854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52790749 52790921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52791517 52791628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 52791782 52791911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2736 nt):
ATGGACGGTGCCATGGGGCCTCGGGGGCTGCTGTTGTGCATGTACCTGGTATCTCTCCTCATCCTGCAGG
CCATGCCTGCCCTGGGCTCGGCTACAGGCAGGTCCAAGAGCAGCGAGAAGCGACAGGCTGTGGACACCGC
TGTCGATGGCGTGTTCATCCGGAGTTTGAAAGTCAACTGCAAAGTCACCTCTCGCTTCGCCCACTATGTT
GTCACCAGCCAAGTGGTCAACACTGCCAATGAAGCCAGGGAAGTGGCCTTCGACCTGGAAATCCCCAAGA
CAGCATTCATCAGTGACTTTGCCGTTACAGCAGATGGAAACGCATTTATCGGAGACATAAAGGACAAGGT
GACTGCATGGAAGCAGTACCGGAAAGCAGCTATCTCAGGAGAGAATGCCGGCCTTGTCAGGGCCTCGGGG
AGAACTATGGAGCAATTCACCATCCACCTCACCGTCAATCCCCAGAGCAAGGTCACGTTTCAGCTGACTT
ATGAGGAAGTGCTGAAGAGAAACCATATGCAGTATGAAATTGTCATCAAAGTCAAGCCCAAGCAGCTGGT
GCATCATTTTGAGATTGATGTGGACATCTTCGAGCCCCAGGGGATCAGCAAGCTGGATGCCCAGGCCTCT
TTCCTGCCGAAGGAACTGGCAGCCCAAACTATCAAGAAGTCCTTCTCAGGAAAAAAGGGTCATGTGCTGT
TCCGTCCCACCGTGAGCCAGCAGCAGTCCTGCCCCACATGCTCTACATCCTTACTGAACGGGCACTTCAA
GGTGACCTACGATGTCAGTCGAGACAAGATCTGCGACCTCCTGGTGGCCAATAACCACTTTGCCCACTTC
TTTGCCCCCCAAAACCTGACAAACATGAACAAGAACGTGGTTTTTGTGATTGACATCAGTGGCTCCATGA
GAGGCCAGAAAGTGAAGCAGACCAAGGAGGCACTCCTTAAAATTCTGGGGGACATGCAGCCAGGGGACTA
CTTTGACCTGGTTCTTTTTGGGACTCGAGTACAATCGTGGAAGGGCTCGCTGGTGCAAGCATCTGAGGCC
AACCTACAAGCAGCTCAAGACTTTGTGCGGGGCTTTTCCCTGGATGAGGCCACAAACCTGAATGGAGGTT
TGCTCCGGGGAATTGAGATCTTGAACCAAGTTCAGGAAAGCCTCCCAGAACTCAGCAACCATGCCTCAAT
ACTCATCATGTTGACAGATGGCGATCCCACAGAGGGGGTGACGGACCGTTCCCAAATCCTCAAGAACGTC
CGCAACGCCATCCGGGGCAGGTTCCCGCTCTACAACCTGGGTTTCGGCCACAATGTGGACTTTAACTTTC
TGGAGGTCATGTCCATGGAGAACAACGGACGGGCCCAGAGAATCTACGAGGACCATGATGCCACCCAGCA
GCTGCAGGGTTTCTACAGCCAGGTAGCCAAACCCCTGCTGGTGGATGTGGATTTGCAGTACCCCCAGGAT
GCTGTCTTGGCCCTGACCCAGAACCACCATAAACAGTACTACGAAGGCTCAGAGATTGTGGTGGCCGGGC
GCATTGCTGACAACAAACAGAGCAGCTTCAAGGCTGATGTGCAGGCCCATGGGGAGGGACAAGAATTCAG
TATAACCTGCCTAGTGGATGAGGAGGAGATGAAGAAACTGCTCCGAGAGCGTGGCCACATGCTGGAGAAC
CACGTCGAGCGCCTCTGGGCCTACCTCACCATCCAGGAGCTGCTGGCCAAGCGGATGAAGGTGGACAGGG
AGGAGAGGGCCAACCTGTCATCCCAGGCCCTGCAGATGTCGCTGGACTATGGGTTTGTGACCCCACTGAC
CTCCATGAGCATCAGGGGCATGGCGGACCAGGACGGCCTGAAGCCCACCATCGACAAGCCCTCAGAGGAT
TCTCCGCCTTTGGAGATGCTGGGACCCAGAAGGACGTTCGTGCTGTCAGCCTTGCAGCCTTCTCCTACTC
ATTCCAGCTCCAATACCCAGCGGCTGCCAGACCGAGTGACCGGCGTGGACACAGACCCTCACTTCATCAT
CCACGTGCCCCAGAAAGAGGACACCCTGTGCTTCAACATCAATGAGGAGCCTGGTGTTATCCTGAGCCTG
GTACAGGACCCCAACACAGGCTTCTCAGTGAATGGACAGCTCATTGGCAACAAGGCCAGGAGCCCTGGGC
AGCATGACGGCACGTACTTCGGGCGGCTGGGAATCGCAAACCCTGCCACGGACTTTCAGTTGGAAGTGAC
TCCTCAGAACATTACGCTGAACCCCGGCTTTGGTGGGCCTGTGTTTTCCTGGAGGGACCAAGCTGTGCTG
CGGCAGGACGGGGTGGTGGTGACCATCAACAAGAAGAGGAACCTGGTGGTGTCTGTGGACGACGGTGGCA
CCTTTGAGGTTGTTTTGCACCGAGTGTGGAAGGGGAGCTCGGTCCACCAGGACTTCCTGGGCTTCTATGT
GCTGGACAGTCATCGGATGTCAGCCCGGACGCACGGGCTGCTGGGGCAATTTTTCCACCCCATCGGTTTT
GAAGTGTCTGACATCCACCCAGGCTCTGACCCCACAAAGCCAGATGCCACGATGGTGGTGAGGAACCGCC
GGCTCACGGTCACCAGGGGTTTGCAAAAAGACTACAGCAAGGACCCGTGGCATGGGGCCGAGGTGTCCTG
CTGGTTCATTCACAACAATGGGGCTGGACTCATCGATGGTGCCTACACTGATTATATCGTCCCCGACATC
TTCTGA

Translation (911 aa):
MDGAMGPRGLLLCMYLVSLLILQAMPALGSATGRSKSSEKRQAVDTAVDGVFIRSLKVNCKVTSRFAHYV
VTSQVVNTANEAREVAFDLEIPKTAFISDFAVTADGNAFIGDIKDKVTAWKQYRKAAISGENAGLVRASG
RTMEQFTIHLTVNPQSKVTFQLTYEEVLKRNHMQYEIVIKVKPKQLVHHFEIDVDIFEPQGISKLDAQAS
FLPKELAAQTIKKSFSGKKGHVLFRPTVSQQQSCPTCSTSLLNGHFKVTYDVSRDKICDLLVANNHFAHF
FAPQNLTNMNKNVVFVIDISGSMRGQKVKQTKEALLKILGDMQPGDYFDLVLFGTRVQSWKGSLVQASEA
NLQAAQDFVRGFSLDEATNLNGGLLRGIEILNQVQESLPELSNHASILIMLTDGDPTEGVTDRSQILKNV
RNAIRGRFPLYNLGFGHNVDFNFLEVMSMENNGRAQRIYEDHDATQQLQGFYSQVAKPLLVDVDLQYPQD
AVLALTQNHHKQYYEGSEIVVAGRIADNKQSSFKADVQAHGEGQEFSITCLVDEEEMKKLLRERGHMLEN
HVERLWAYLTIQELLAKRMKVDREERANLSSQALQMSLDYGFVTPLTSMSIRGMADQDGLKPTIDKPSED
SPPLEMLGPRRTFVLSALQPSPTHSSSNTQRLPDRVTGVDTDPHFIIHVPQKEDTLCFNINEEPGVILSL
VQDPNTGFSVNGQLIGNKARSPGQHDGTYFGRLGIANPATDFQLEVTPQNITLNPGFGGPVFSWRDQAVL
RQDGVVVTINKKRNLVVSVDDGGTFEVVLHRVWKGSSVHQDFLGFYVLDSHRMSARTHGLLGQFFHPIGF
EVSDIHPGSDPTKPDATMVVRNRRLTVTRGLQKDYSKDPWHGAEVSCWFIHNNGAGLIDGAYTDYIVPDI
F


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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