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Report for CCDS3033.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3033.1 Public Homo sapiens 3 OSBPL11 24 110 108 CCDS HistoryNCBI Gene:114885Re-query CCDS DB by CCDS ID:3033.1Re-query CCDS DB by GeneID:114885See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3033.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296220.6 ENSP00000296220.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000296220.6Link to Ensembl Protein Viewer:ENSP00000296220.5Re-query CCDS DB by Nucleotide ID:ENST00000296220Re-query CCDS DB by Protein ID:ENSP00000296220
Original member Current member NCBI NM_022776.5 NP_073613.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022776.5Link to Protein Sequence:NP_073613.2Re-query CCDS DB by Nucleotide ID:NM_022776Re-query CCDS DB by Protein ID:NP_073613Link to BLAST:NP_073613.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_073613.2 747 Q9BXB4 747 100% 0 0

Chromosomal Locations for CCDS 3033.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 125530515 125530580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125531861 125532014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125538451 125538633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125547406 125547592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125552181 125552679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125560379 125560519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125563698 125563843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125567394 125567595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125576189 125576365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125578960 125579039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125579865 125580040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125582910 125582978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 125594637 125594800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2244 nt):
ATGCAGGGGGGTGAACCAGTGTCCACAATGAAAGTCTCGGAGAGCGAAGGAAAGCTGGAGGGCCAGGCCA
CAGCGGTGACCCCGAACAAGAACAGCAGCTGTGGAGGTGGAATCAGTAGCAGCAGCAGCAGCCGCGGTGG
CAGTGCAAAAGGCTGGCAGTACAGTGATCACATGGAAAATGTGTATGGCTATTTAATGAAGTATACCAAC
CTTGTCACTGGGTGGCAGTACAGGTTTTTTGTTTTAAACAATGAAGCTGGGCTGTTGGAGTACTTTGTGA
ATGAACAGTCTAGAAATCAGAAACCTAGAGGAACTTTGCAGCTTGCAGGAGCTGTAATATCACCCAGTGA
TGAGGATTCTCACACCTTCACTGTAAACGCTGCCAGTGGGGAACAATATAAACTCAGAGCTACAGATGCA
AAAGAGCGACAGCACTGGGTTAGCAGACTTCAGATATGTACACAGCATCATACTGAAGCTATTGGAAAGA
ATAATCCTCCTCTGAAGTCACGGAGCTTCTCACTTGCATCTAGTAGTAATTCTCCTATATCGCAGAGGAG
ACCAAGTCAAAATGCCATTTCTTTTTTTAATGTTGGACATTCCAAACTGCAATCACTGAGCAAAAGAACT
AATTTACCTCCAGACCATCTTGTGGAAGTCAGAGAAATGATGTCTCATGCTGAAGGACAACAAAGAGACT
TAATTAGACGAATTGAATGCCTTCCTACTTCTGGCCATCTTAGTTCCTTGGACCAGGATCTCTTAATGCT
CAAAGCTACTTCCATGGCAACTATGAACTGCTTAAATGACTGCTTTCATATTCTCCAGTTACAGCATGCA
TCACATCAGAAGGGCTCATTGCCTTCAGGAACGACAATCGAGTGGTTAGAACCAAAGATATCTTTATCAA
ACCACTATAAAAATGGAGCTGACCAGCCCTTTGCAACTGATCAGAGTAAGCCGGTGGCAGTCCCAGAAGA
GCAGCCTGTTGCAGAATCTGGACTATTAGCGAGGGAGCCTGAAGAAATAAATGCAGATGATGAGATAGAG
GATACATGTGACCACAAAGAGGATGACCTGGGAGCTGTAGAAGAACAACGTAGTGTCATCCTACATCTCT
TGTCACAGCTTAAGCTGGGCATGGATTTAACAAGAGTGGTGCTTCCTACATTTATCCTAGAGAAGCGTTC
CTTGCTGGAAATGTATGCAGACTTTATGTCTCATCCAGACCTATTTATAGCCATCACTAATGGAGCCACA
GCTGAGGACAGAATGATTCGCTTTGTTGAGTACTACCTTACCTCATTTCATGAAGGCCGTAAGGGAGCCA
TTGCTAAAAAACCATACAATCCTATCATTGGAGAAACATTTCACTGTTCCTGGAAGATGCCAAAAAGCGA
GGTAGCATCCAGTGTTTTTAGCAGTTCTTCCACCCAGGGAGTCACAAATCATGCTCCTTTATCGGGGGAG
TCTTTGACCCAGGTGGGATCAGACTGTTACACAGTCAGATTTGTTGCTGAGCAGGTTTCTCATCATCCTC
CAGTCTCAGGATTTTATGCAGAATGTACAGAGAGGAAGATGTGTGTAAATGCGCATGTCTGGACTAAGAG
CAAGTTCTTAGGCATGTCAATAGGCGTGACAATGGTTGGAGAAGGTATCCTTAGTCTGTTGGAGCATGGA
GAAGAGTACACATTTTCTCTACCCTGTGCATATGCTCGGTCAATTTTGACTGTTCCTTGGGTAGAACTGG
GTGGCAAAGTCAGTGTCAACTGTGCAAAAACTGGATATTCAGCCAGCATCACTTTTCATACCAAGCCATT
TTATGGTGGCAAACTGCATCGGGTTACAGCTGAAGTAAAGCACAACATCACCAACACTGTGGTATGCAGA
GTGCAAGGGGAATGGAATAGTGTTCTTGAGTTCACATATAGCAATGGAGAGACAAAGTATGTGGACTTGA
CTAAATTGGCAGTGACGAAGAAAAGAGTGAGACCTCTGGAGAAGCAGGATCCATTTGAATCCAGGCGATT
GTGGAAAAATGTGACAGACTCGCTGAGAGAATCTGAAATTGATAAGGCCACAGAGCATAAGCATACCCTG
GAAGAACGTCAGAGGACTGAAGAAAGGCATCGTACTGAAACAGGCACACCTTGGAAAACCAAATATTTTA
TTAAAGAGGGAGATGGCTGGGTTTATCATAAACCACTTTGGAAAATAATTCCAACAACACAACCAGCAGA
GTGA

Translation (747 aa):
MQGGEPVSTMKVSESEGKLEGQATAVTPNKNSSCGGGISSSSSSRGGSAKGWQYSDHMENVYGYLMKYTN
LVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAVISPSDEDSHTFTVNAASGEQYKLRATDA
KERQHWVSRLQICTQHHTEAIGKNNPPLKSRSFSLASSSNSPISQRRPSQNAISFFNVGHSKLQSLSKRT
NLPPDHLVEVREMMSHAEGQQRDLIRRIECLPTSGHLSSLDQDLLMLKATSMATMNCLNDCFHILQLQHA
SHQKGSLPSGTTIEWLEPKISLSNHYKNGADQPFATDQSKPVAVPEEQPVAESGLLAREPEEINADDEIE
DTCDHKEDDLGAVEEQRSVILHLLSQLKLGMDLTRVVLPTFILEKRSLLEMYADFMSHPDLFIAITNGAT
AEDRMIRFVEYYLTSFHEGRKGAIAKKPYNPIIGETFHCSWKMPKSEVASSVFSSSSTQGVTNHAPLSGE
SLTQVGSDCYTVRFVAEQVSHHPPVSGFYAECTERKMCVNAHVWTKSKFLGMSIGVTMVGEGILSLLEHG
EEYTFSLPCAYARSILTVPWVELGGKVSVNCAKTGYSASITFHTKPFYGGKLHRVTAEVKHNITNTVVCR
VQGEWNSVLEFTYSNGETKYVDLTKLAVTKKRVRPLEKQDPFESRRLWKNVTDSLRESEIDKATEHKHTL
EERQRTEERHRTETGTPWKTKYFIKEGDGWVYHKPLWKIIPTTQPAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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