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Report for CCDS30527.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30527.1 Public Mus musculus X Rab9 23 108 98 CCDS HistoryNCBI Gene:56382Re-query CCDS DB by CCDS ID:30527.1Re-query CCDS DB by GeneID:56382See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30527.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112091.8 ENSMUSP00000123325.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112091.8Link to Ensembl Protein Viewer:ENSMUSP00000123325.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112091Re-query CCDS DB by Protein ID:ENSMUSP00000123325
Original member Current member NCBI NM_019773.2 NP_062747.1 Accepted alive Link to Nucleotide Sequence:NM_019773.2Link to Protein Sequence:NP_062747.1Re-query CCDS DB by Nucleotide ID:NM_019773Re-query CCDS DB by Protein ID:NP_062747Link to BLAST:NP_062747.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062747.1 201 Q9R0M6 201 100% 0 0

Chromosomal Locations for CCDS 30527.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 166457708 166458313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGGCAGGAAAATCGTCTCTTTTTAAAATAATTCTTCTTGGAGATGGTGGAGTTGGCAAGAGTTCTCTTA
TGAACAGATATGTAACCAATAAATTTGATTCCCAGCTCTTCCACACAATAGGTGTGGAATTTTTAAATAA
AGATCTGGAGGTGGACGGACATTTTGTTACCATGCAGATTTGGGACACAGCTGGCCAAGAACGCTTCCGA
AGCCTGAGGACGCCATTTTACCGGGGTTCTGACTGTTGCCTGCTTACATTTAGTGTCGATGATTCACAGA
GCTTCCAGAATTTGAGCAACTGGAAGAAAGAGTTCATATATTACGCAGATGTGAAAGAGCCTGAAAGCTT
TCCCTTTGTGATTTTGGGCAACAAGACTGACATAAAAGAACGGCAGGTGTCTACAGAAGAAGCCCAAGCC
TGGTGCAAGGACAACGGCGACTATCCTTACTTTGAAACAAGTGCAAAAGATTCCACCAATGTTGCTGCTG
CCTTTGAGGAGGCAGTTCGAAGAATTCTGGCCACGGAAGATAGGTCAGAACACCTGATTCAGACAGACAC
AGTCAATCTGCACCGAAAGCCCAAGCCAAACTCATCTTGCTGTTGA

Translation (201 aa):
MAGKSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFR
SLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKERQVSTEEAQA
WCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSEHLIQTDTVNLHRKPKPNSSCC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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