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Report for CCDS30745.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30745.1 Public Homo sapiens 1 C1orf141 24 110 108 CCDS HistoryNCBI Gene:400757Re-query CCDS DB by CCDS ID:30745.1Re-query CCDS DB by GeneID:400757See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30745.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371006.5 ENSP00000360045.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371006.5Link to Ensembl Protein Viewer:ENSP00000360045.1Re-query CCDS DB by Nucleotide ID:ENST00000371006Re-query CCDS DB by Protein ID:ENSP00000360045
Original member Current member EBI ENST00000371007.6 ENSP00000360046.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371007.6Link to Ensembl Protein Viewer:ENSP00000360046.1Re-query CCDS DB by Nucleotide ID:ENST00000371007Re-query CCDS DB by Protein ID:ENSP00000360046
Original member Current member EBI ENST00000684719.1 ENSP00000507487.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000684719.1Link to Ensembl Protein Viewer:ENSP00000507487.1Re-query CCDS DB by Nucleotide ID:ENST00000684719Re-query CCDS DB by Protein ID:ENSP00000507487
Original member Current member NCBI NM_001276351.2 NP_001263280.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001276351.2Link to Protein Sequence:NP_001263280.1Re-query CCDS DB by Nucleotide ID:NM_001276351Re-query CCDS DB by Protein ID:NP_001263280Link to BLAST:NP_001263280.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001263280.1 400 Q5JVX7-1 400 100% 0 0

Chromosomal Locations for CCDS 30745.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 67093005 67093604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67095235 67095421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67096252 67096321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67115352 67115464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67125752 67125909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 67127166 67127240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1203 nt):
ATGGCAGAAAAAATCCTAGAGAAGTTGGATGTCCTTGATAAGCAAGCAGAGATAATCTTGGCCAGAAGAA
CAAAGATAAACAGGCTTCAGAGTGAAGGAAGAAAAACAACTATGGCTATACCCCTGACATTTGATTTTCA
GTTGGAATTTGAAGAAGCTCTTGCTACATCCGCGTCTAAGGCAATATCAAAGATCAAAGAAGACAAGTCA
TGCAGCATTACAAAATCAAAAATGCATGTCTCTTTCAAATGTGAGCCTGAACCTAGAAAGAGTAATTTTG
AAAAGTCAAATTTAAGACCATTCTTTATTCAAACAAATGTAAAAAATAAAGAAAGTGAGTCAACAGCTCA
AATTGAAAAAAAACCTAGGAAACCATTGGATTCTGTTGGTCTCTTAGAAGGTGATAGAAATAAAAGAAAA
AAATCTCCACAGATGAACGATTTTAATATAAAAGAAAACAAATCGGTCAGAAATTATCAATTAAGTAAGT
ATAGGTCAGTAAGAAAGAAAAGCTTGCTCCCGTTGTGCTTTGAGGATGAATTGAAAAATCCACATGCCAA
GATAGTCAACGTTAGTCCAACAAAGACAGTAACTTCTCACATGGAACAAAAGGACACAAATCCCATAATT
TTCCATGACACAGAATATGTACGAATGTTACTTTTGACAAAAAATAGATTTTCTTCTCATCCTTTGGAAA
ATGAAAACATTTACCCACATAAAAGAACAAATTTCATTTTAGAAAGAAATTGTGAAATCCTCAAATCTAT
AATTGGCAATCAATCTATTTCTCTTTTCAAACCCCAAAAAACTATGCCTACAGTACAGAGAAAAGATATA
CAGATCCCTATGTCTTTTAAAGCGGGCCACACAACTGTAGATGATAAACTAAAGAAGAAAACTAATAAGC
AGACACTAGAAAACAGATCTTGGAATACACTCTATAATTTCTCACAGAATTTTTCTAGCCTAACAAAACA
ATTTGTGGGTTACCTTGATAAAGCTGTTATTCATGAAATGAGTGCCCAAACTGGAAAATTTGAAAGAATG
TTTTCTGCAGGAAAACCAACGAGCATACCCACATCCAGTGCCTTACCTGTCAAATGTTACTCAAAGCCTT
TTAAATATATATATGAACTAAATAATGTAACGCCACTGGATAATTTGTTAAACTTATCAAATGAAATTTT
AAATGCCTCATAA

Translation (400 aa):
MAEKILEKLDVLDKQAEIILARRTKINRLQSEGRKTTMAIPLTFDFQLEFEEALATSASKAISKIKEDKS
CSITKSKMHVSFKCEPEPRKSNFEKSNLRPFFIQTNVKNKESESTAQIEKKPRKPLDSVGLLEGDRNKRK
KSPQMNDFNIKENKSVRNYQLSKYRSVRKKSLLPLCFEDELKNPHAKIVNVSPTKTVTSHMEQKDTNPII
FHDTEYVRMLLLTKNRFSSHPLENENIYPHKRTNFILERNCEILKSIIGNQSISLFKPQKTMPTVQRKDI
QIPMSFKAGHTTVDDKLKKKTNKQTLENRSWNTLYNFSQNFSSLTKQFVGYLDKAVIHEMSAQTGKFERM
FSAGKPTSIPTSSALPVKCYSKPFKYIYELNNVTPLDNLLNLSNEILNAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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