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Report for CCDS30787.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30787.1 Public Homo sapiens 1 WDR47 24 110 108 CCDS HistoryNCBI Gene:22911Re-query CCDS DB by CCDS ID:30787.1Re-query CCDS DB by GeneID:22911See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30787.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369965.8 ENSP00000358982.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369965.8Link to Ensembl Protein Viewer:ENSP00000358982.4Re-query CCDS DB by Nucleotide ID:ENST00000369965Re-query CCDS DB by Protein ID:ENSP00000358982
Original member Current member NCBI NM_014969.6 NP_055784.3 Accepted alive Link to Nucleotide Sequence:NM_014969.6Link to Protein Sequence:NP_055784.3Re-query CCDS DB by Nucleotide ID:NM_014969Re-query CCDS DB by Protein ID:NP_055784Link to BLAST:NP_055784.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055784.3 920 O94967-3 920 100% 0 0

Chromosomal Locations for CCDS 30787.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 108971430 108971572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108974536 108974754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108981733 108981864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108982609 108982779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108983282 108983451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108986523 108986680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108991254 108991329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 108995580 108995837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109002224 109002402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109004592 109004718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109010916 109011718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109013841 109013925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109017518 109017601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109023355 109023512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2763 nt):
ATGACGGCTGAAGAAACAGTGAATGTAAAAGAGGTTGAAATCATTAAGCTAATTTTGGACTTCCTGAATT
CAAAGAAGCTTCACATTAGTATGCTGGCCCTGGAGAAGGAAAGTGGAGTCATAAATGGCCTGTTTTCAGA
TGATATGCTTTTCCTGAGGCAGCTAATACTTGATGGTCAATGGGATGAAGTTCTTCAGTTCATTCAGCCT
CTAGAATGTATGGAAAAATTTGACAAAAAAAGGTTTCGTTATATTATCCTGAAGCAGAAGTTTTTAGAAG
CTTTATGTGTTAACAACGCGATGTCAGCAGAAGATGAGCCCCAGCATCTGGAATTTACCATGCAAGAAGC
TGTGCAATGTTTACATGCTCTAGAAGAATACTGTCCTTCTAAAGATGACTATAGTAAGCTCTGTTTGCTT
TTGACTTTGCCTCGTCTGACCAATCATGCCGAGTTTAAGGACTGGAATCCCAGCACCGCACGAGTTCACT
GTTTTGAAGAGGCTTGTGTCATGGTTGCAGAATTCATCCCTGCTGATAGGAAGCTAAGTGAAGCTGGTTT
TAAGGCTAGTAACAATCGTTTATTTCAGCTTGTAATGAAAGGCCTGCTTTATGAATGCTGTGTAGAATTT
TGTCAGAGTAAAGCAACTGGAGAAGAAATTACAGAAAGCGAAGTGCTTCTTGGCATCGACCTCTTATGTG
GTAATGGTTGTGATGATTTGGATCTGAGTTTACTGTCATGGCTTCAGAATCTTCCATCTTCTGTCTTCTC
TTGTGCTTTTGAACAGAAAATGCTTAATATTCATGTTGACAAACTTCTGAAACCTACAAAAGCTGCATAT
GCTGATCTTTTGACTCCTCTTATCAGCAAACTCTCTCCCTATCCATCATCCCCAATGAGAAGACCTCAAT
CAGCTGATGCCTATATGACCCGCTCTCTGAATCCTGCTTTAGATGGCCTCACCTGTGGACTAACCAGTCA
TGATAAGAGAATTTCAGACCTTGGAAACAAAACTTCTCCAATGTCACACTCCTTTGCTAACTTCCATTAT
CCAGGGGTACAAAACCTCAGTAGAAGTCTCATGCTTGAGAATACAGAATGTCACAGTATTTACGAAGAAT
CCCCTGAGCGAAGTGATACACCTGTTGATGCACAGAGGCCTATCGGCAGTGAAATCTTGGGCCAGAGTTC
AGTTTCAGAAAAAGAGCCTGCAAATGGAGCACAGAATCCAGGACCAGCTAAACAAGAAAAAAATGAGCTT
CGAGATTCAACAGAACAATTTCAAGAATATTATAGGCAAAGATTACGCTATCAACAGCATTTAGAACAGA
AGGAGCAACAGCGGCAGATATACCAACAGATGTTGCTTGAAGGAGGCGTGAATCAGGAGGATGGTCCTGA
TCAGCAGCAGAATCTTACTGAACAGTTCCTTAATAGGTCCATTCAAAAGCTTGGTGAATTAAATATTGGA
ATGGATGGCCTTGGTAATGAGGTATCAGCACTCAACCAGCAATGTAATGGGAGCAAAGGCAATGGATCTA
ATGGTTCTTCTGTGACTAGTTTTACTACACCACCCCAAGACTCTAGTCAGAGATTAACACATGATGCTTC
AAATATTCATACAAGCACTCCTCGTAATCCTGGATCAACAAATCACATACCTTTTCTGGAGGAATCACCT
TGTGGAAGCCAAATCTCTTCAGAACATTCGGTCATTAAGCCACCTCTTGGAGATTCTCCAGGGAGTCTTT
CAAGGTCGAAAGGGGAAGAGGATGACAAATCAAAAAAGCAGTTTGTTTGTATTAATATCCTAGAAGACAC
ACAAGCTGTTAGAGCAGTGGCTTTTCATCCAGCTGGAGGTTTATATGCTGTTGGTTCAAATTCAAAAACT
CTGAGAGTATGTGCCTATCCAGATGTAATTGATCCAAGTGCACATGAGACTCCTAAGCAGCCGGTGGTAC
GTTTTAAAAGGAATAAACATCATAAAGGATCCATTTACTGTGTGGCCTGGAGTCCTTGTGGGCAGTTATT
AGCAACAGGATCAAATGACAAATACGTCAAAGTGCTGCCCTTCAATGCAGAGACTTGTAACGCAACAGGA
CCAGATCTGGAATTTAGTATGCATGATGGAACAATTAGAGACTTGGCATTTATGGAAGGCCCAGAAAGCG
GAGGAGCTATTTTAATAAGTGCTGGAGCAGGGGATTGTAACATTTATACAACCGATTGTCAAAGAGGACA
GGGCCTCCATGCTTTGAGTGGACATACTGGGCATATTTTAGCACTTTATACCTGGAGTGGCTGGATGATT
GCATCTGGTTCCCAAGATAAGACTGTTAGATTTTGGGATCTTCGAGTACCAAGTTGTGTTCGTGTTGTTG
GCACAACATTTCATGGAACTGGCAGTGCAGTGGCATCTGTAGCTGTAGATCCCAGTGGTCGTCTCTTAGC
CACAGGTCAAGAAGATTCTAGCTGCATGTTGTATGACATAAGAGGAGGAAGAATGGTACAAAGTTATCAT
CCTCATTCCAGTGATGTTCGCTCTGTTCGATTCTCCCCTGGAGCTCACTACTTGCTAACAGGCTCTTATG
ATATGAAAATAAAGGTGACAGACCTACAAGGGGACCTCACCAAGCAGCTTCCTATCATGGTGGTGGGGGA
GCACAAGGACAAAGTGATTCAGTGCAGATGGCACACCCAGGATCTTTCCTTCCTGTCATCCTCTGCAGAT
AGAACTGTCACCCTCTGGACTTACAATGGGTAG

Translation (920 aa):
MTAEETVNVKEVEIIKLILDFLNSKKLHISMLALEKESGVINGLFSDDMLFLRQLILDGQWDEVLQFIQP
LECMEKFDKKRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQCLHALEEYCPSKDDYSKLCLL
LTLPRLTNHAEFKDWNPSTARVHCFEEACVMVAEFIPADRKLSEAGFKASNNRLFQLVMKGLLYECCVEF
CQSKATGEEITESEVLLGIDLLCGNGCDDLDLSLLSWLQNLPSSVFSCAFEQKMLNIHVDKLLKPTKAAY
ADLLTPLISKLSPYPSSPMRRPQSADAYMTRSLNPALDGLTCGLTSHDKRISDLGNKTSPMSHSFANFHY
PGVQNLSRSLMLENTECHSIYEESPERSDTPVDAQRPIGSEILGQSSVSEKEPANGAQNPGPAKQEKNEL
RDSTEQFQEYYRQRLRYQQHLEQKEQQRQIYQQMLLEGGVNQEDGPDQQQNLTEQFLNRSIQKLGELNIG
MDGLGNEVSALNQQCNGSKGNGSNGSSVTSFTTPPQDSSQRLTHDASNIHTSTPRNPGSTNHIPFLEESP
CGSQISSEHSVIKPPLGDSPGSLSRSKGEEDDKSKKQFVCINILEDTQAVRAVAFHPAGGLYAVGSNSKT
LRVCAYPDVIDPSAHETPKQPVVRFKRNKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCNATG
PDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMI
ASGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYH
PHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGEHKDKVIQCRWHTQDLSFLSSSAD
RTVTLWTYNG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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