NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS31273.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31273.1 Public Homo sapiens 10 FBXL15 24 110 108 CCDS HistoryNCBI Gene:79176Re-query CCDS DB by CCDS ID:31273.1Re-query CCDS DB by GeneID:79176See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31273.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369956.8 ENSP00000358972.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369956.8Link to Ensembl Protein Viewer:ENSP00000358972.3Re-query CCDS DB by Nucleotide ID:ENST00000369956Re-query CCDS DB by Protein ID:ENSP00000358972
Original member Current member NCBI NM_001387294.1 NP_001374223.1 Accepted alive Link to Nucleotide Sequence:NM_001387294.1Link to Protein Sequence:NP_001374223.1Re-query CCDS DB by Nucleotide ID:NM_001387294Re-query CCDS DB by Protein ID:NP_001374223Link to BLAST:NP_001374223.1
Original member Current member NCBI NM_024326.4 NP_077302.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024326.4Link to Protein Sequence:NP_077302.3Re-query CCDS DB by Nucleotide ID:NM_024326Re-query CCDS DB by Protein ID:NP_077302Link to BLAST:NP_077302.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001374223.1 300 Q9H469 300 100% 0 0
NP_077302.3 300 Q9H469 300 100% 0 0

Chromosomal Locations for CCDS 31273.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 102421130 102421182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102421354 102421507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102421787 102422292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 102422804 102422993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (903 nt):
ATGGAGCCACCGATGGAGCCGTCCGGAGGGGAGCAAGAGCCCGGAGCCGTCAGGTTCCTGGACCTGCCCT
GGGAAGACGTGCTGCTCCCACACGTCCTGAACCGGGTCCCGCTGCGCCAGCTGCTCCGGCTGCAGCGCGT
TAGCCGGGCCTTCCGGTCGCTGGTGCAGCTTCACCTGGCCGGGCTGCGTCGCTTCGATGCCGCGCAGGTG
GGTCCGCAGATCCCGCGGGCCGCATTGGCCCGGCTGCTGCGGGATGCCGAGGGGCTGCAGGAGCTGGCAC
TGGCGCCGTGTCACGAATGGCTGTCAGACGAGGACCTGGTGCCGGTGCTGGCGCGGAATCCGCAGCTGCG
GAGTGTGGCGTTGGGCGGCTGCGGGCAACTGAGTCGCCGGGCGCTTGGGGCTTTGGCCGAGGGCTGCCCA
CGCCTGCAGCGCCTGTCGCTCGCGCACTGTGACTGGGTGGACGGGCTGGCGCTGCGCGGCCTCGCTGATC
GCTGCCCGGCCCTGGAGGAGCTGGATCTCACCGCCTGCCGCCAGCTCAAGGACGAGGCCATCGTGTACCT
GGCGCAGAGGCGCGGCGCTGGTCTCCGCAGCCTCTCTCTGGCCGTCAACGCCAACGTGGGGGACGCCGCG
GTTCAAGAGTTGGCTCGGAACTGCCCAGAACTCCACCACCTTGACCTCACCGGCTGCCTCCGCGTCGGAA
GCGACGGTGTCAGGACATTGGCCGAGTACTGCCCCGTGCTGCGTTCGCTGCGGGTGCGGCACTGCCACCA
TGTGGCGGAGTCCAGCCTGAGCCGCTTGCGGAAGCGCGGCGTGGACATCGACGTGGAGCCGCCGCTGCAC
CAGGCCCTGGTGCTGCTGCAGGATATGGCGGGCTTCGCACCTTTTGTCAACCTGCAGGTCTGA

Translation (300 aa):
MEPPMEPSGGEQEPGAVRFLDLPWEDVLLPHVLNRVPLRQLLRLQRVSRAFRSLVQLHLAGLRRFDAAQV
GPQIPRAALARLLRDAEGLQELALAPCHEWLSDEDLVPVLARNPQLRSVALGGCGQLSRRALGALAEGCP
RLQRLSLAHCDWVDGLALRGLADRCPALEELDLTACRQLKDEAIVYLAQRRGAGLRSLSLAVNANVGDAA
VQELARNCPELHHLDLTGCLRVGSDGVRTLAEYCPVLRSLRVRHCHHVAESSLSRLRKRGVDIDVEPPLH
QALVLLQDMAGFAPFVNLQV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH