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Report for CCDS31309.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31309.1 Public Homo sapiens 10 FANK1 24 110 108 CCDS HistoryNCBI Gene:92565Re-query CCDS DB by CCDS ID:31309.1Re-query CCDS DB by GeneID:92565See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31309.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368693.6 ENSP00000357682.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368693.6Link to Ensembl Protein Viewer:ENSP00000357682.1Re-query CCDS DB by Nucleotide ID:ENST00000368693Re-query CCDS DB by Protein ID:ENSP00000357682
Original member Current member NCBI NM_145235.5 NP_660278.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145235.5Link to Protein Sequence:NP_660278.3Re-query CCDS DB by Nucleotide ID:NM_145235Re-query CCDS DB by Protein ID:NP_660278Link to BLAST:NP_660278.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660278.3 345 Q8TC84-1 345 100% 0 0

Chromosomal Locations for CCDS 31309.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 125896643 125896655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125980161 125980338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125988551 125988675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125995417 125995498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125996550 125996624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125997420 125997485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126004884 126005049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126008407 126008550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126009054 126009131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126009222 126009266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 126009373 126009438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1038 nt):
ATGGAGCCCCAGAAAATCATGCCACCCTCAAAGCCTCATCCACCTGTCGTGGGCAAAGTGACTCATCACA
GCATTGAATTATACTGGGATCTGGAAAAGAAAGCCAAACGCCAAGGACCTCAAGAGCAGTGGTTCAGGTT
CTCGATTGAAGAAGAAGACCCCAAAATGCACACTTATGGTATCATTTATACGGGATATGCAACGAAGCAT
GTTGTTGAAGGTCTGGAACCAAGGACGCTGTACAGATTTCGCCTGAAGGTCACCAGCCCCTCTGGGGAGT
GTGAGTACAGCCCACTCGTCTCAGTGTCTACAACCAGAGAGCCCATAAGTAGTGAGCACTTGCACCGGGC
TGTCAGTGTGAATGATGAAGATTTGCTGGTCCGAATACTTCAAGGAGGCCGTGTTAAGGTTGATGTTCCC
AATAAGTTTGGCTTTACCGCTCTGATGGTTGCTGCCCAGAAAGGATACACCAGGCTTGTGAAAATCCTAG
TTTCTAATGGCACAGACGTGAATCTGAAGAATGGAAGTGGCAAGGACAGTCTAATGCTGGCGTGCTATGC
GGGACACCTAGATGTTGTGAAATATCTCCGAAGACATGGCGCTTCTTGGCAGGCTAGAGACCTGGGAGGC
TGTACAGCTCTGCACTGGGCTGCAGATGGAGGCCACTGCAGTGTGATTGAGTGGATGATAAAGGATGGCT
GTGAGGTAGACGTCGTGGACACTGGTTCAGGATGGACCCCACTCATGAGAGTCTCTGCGGTGTCGGGAAA
TCAGAGGGTGGCCTCTCTTCTAATTGATGCTGGGGCCAATGTGAATGTGAAGGACAGAAATGGAAAGACG
CCCCTTATGGTGGCTGTGTTAAATAATCATGAAGAGTTAGTTCAGTTACTTCTTGACAAAGGGGCAGATG
CAAGTGTAAAAAATGAGTTCGGCAAAGGTGTCCTAGAAATGGCCAGAGTTTTTGACAGACAGAGTGTAGT
CTCCTTATTAGAAGAAAGGAAAAAAAAGCAGAGGCCAAAGAAGTCTTGTGTCTGCTGA

Translation (345 aa):
MEPQKIMPPSKPHPPVVGKVTHHSIELYWDLEKKAKRQGPQEQWFRFSIEEEDPKMHTYGIIYTGYATKH
VVEGLEPRTLYRFRLKVTSPSGECEYSPLVSVSTTREPISSEHLHRAVSVNDEDLLVRILQGGRVKVDVP
NKFGFTALMVAAQKGYTRLVKILVSNGTDVNLKNGSGKDSLMLACYAGHLDVVKYLRRHGASWQARDLGG
CTALHWAADGGHCSVIEWMIKDGCEVDVVDTGSGWTPLMRVSAVSGNQRVASLLIDAGANVNVKDRNGKT
PLMVAVLNNHEELVQLLLDKGADASVKNEFGKGVLEMARVFDRQSVVSLLEERKKKQRPKKSCVC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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