NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS31488.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31488.1 Public Homo sapiens 11 OR4S1 24 110 108 CCDS HistoryNCBI Gene:256148Re-query CCDS DB by CCDS ID:31488.1Re-query CCDS DB by GeneID:256148See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 31488.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319988.1 ENSP00000321447.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319988.1Link to Ensembl Protein Viewer:ENSP00000321447.1Re-query CCDS DB by Nucleotide ID:ENST00000319988Re-query CCDS DB by Protein ID:ENSP00000321447
Original member Current member NCBI NM_001004725.1 NP_001004725.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004725.1Link to Protein Sequence:NP_001004725.1Re-query CCDS DB by Nucleotide ID:NM_001004725Re-query CCDS DB by Protein ID:NP_001004725Link to BLAST:NP_001004725.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004725.1 309 Q8NGB4 309 100% 0 0

Chromosomal Locations for CCDS 31488.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 48306223 48307152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGGTGCCAAGAACAATGTGACTGAGTTTGTTTTATTTGGCCTTTTTGAGAGCAGAGAGATGCAGCATA
CATGCTTTGTGGTATTCTTCCTCTTTCATGTGCTCACTGTCCTGGGGAACCTTCTGGTCATCATCACCAT
CAATGCTAGAAAGACCCTGAAGTCTCCCATGTATTTCTTCCTGAGCCAGTTGTCTTTTGCTGACATATGT
TATCCATCCACTACCATACCCAAGATGATTGCTGACACTTTTGTGGAGCATAAGATCATCTCCTTCAATG
GCTGCATGACCCAGCTCTTTTCTGCCCACTTCTTTGGTGGCACTGAGATCTTCCTCCTTACAGCCATGGC
CTATGACCGCTATGTGGCCATCTGTAGGCCCCTGCACTACACAGCCATCATGGATTGCCGGAAGTGTGGC
CTGCTAGCGGGGGCCTCCTGGTTAGCTGGCTTCCTGCATTCCATCCTGCAGACCCTCCTCACGGTTCAGC
TGCCTTTTTGTGGGCCCAATGAGATAGACAACTTCTTCTGTGATGTTCATCCCCTGCTCAAGTTGGCCTG
TGCAGACACCTACATGGTAGGTCTCATCGTGGTGGCCAACAGCGGTATGATTTCTTTAGCATCCTTTTTT
ATCCTTATCATTTCCTATGTTATCATCTTACTGAACCTAAGAAGCCAGTCATCTGAGGACCGGCGTAAGG
CTGTCTCCACATGTGGCTCACACGTAATCACTGTCCTTTTGGTTCTCATGCCCCCCATGTTCATGTACAT
TCGTCCCTCCACCACCCTGGCTGCTGACAAACTTATCATCCTCTTTAACATTGTGATGCCACCTTTGCTG
AACCCTTTGATCTATACACTAAGGAACAACGATGTGAAAAATGCCATGAGGAAGCTGTTTAGGGTCAAGA
GGAGCTTAGGGGAGAAGTGA

Translation (309 aa):
MGAKNNVTEFVLFGLFESREMQHTCFVVFFLFHVLTVLGNLLVIITINARKTLKSPMYFFLSQLSFADIC
YPSTTIPKMIADTFVEHKIISFNGCMTQLFSAHFFGGTEIFLLTAMAYDRYVAICRPLHYTAIMDCRKCG
LLAGASWLAGFLHSILQTLLTVQLPFCGPNEIDNFFCDVHPLLKLACADTYMVGLIVVANSGMISLASFF
ILIISYVIILLNLRSQSSEDRRKAVSTCGSHVITVLLVLMPPMFMYIRPSTTLAADKLIILFNIVMPPLL
NPLIYTLRNNDVKNAMRKLFRVKRSLGEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH