NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS31499.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31499.1 Public Homo sapiens 11 OR4A16 24 110 108 CCDS HistoryNCBI Gene:81327Re-query CCDS DB by CCDS ID:31499.1Re-query CCDS DB by GeneID:81327See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31499.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314721.5 ENSP00000325128.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314721.5Link to Ensembl Protein Viewer:ENSP00000325128.2Re-query CCDS DB by Nucleotide ID:ENST00000314721Re-query CCDS DB by Protein ID:ENSP00000325128
Original member Current member NCBI NM_001005274.1 NP_001005274.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005274.1Link to Protein Sequence:NP_001005274.1Re-query CCDS DB by Nucleotide ID:NM_001005274Re-query CCDS DB by Protein ID:NP_001005274Link to BLAST:NP_001005274.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005274.1 328 Q8NH70 328 100% 0 0

Chromosomal Locations for CCDS 31499.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 55343201 55344187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGAGACCAAGCAGCAATGTTACAGAATTTGTCCTCCTGGGCCTCACTCAAGATCCTGATGTGAAAAAAA
CA
TTATTTGTCATGTTTTTACTCATATACATTGTGACAATGGTGGGAAACCTCCTCATTTGGGTGACTAC
T
ATTGGCAGCCCCTCCTTGGGCTCCCTAATGTACTTCTTCCTTGCCTACTTGTCACTTATGGATGCCATA
TAT
TCCACTGCCATGTCACCCAAATTGATGATAGACTTACTCTGTGATAAAATCGCTATTTCCTTGTCAG
CT
TGCATGGGTCAGCTCTTCATAGAACACTTACTTGGTGGTGCAGAGGTCTTCCTTTTGGTGGTGATGGC
C
TATGATCGCTATGTGGCTATCTCTAAGCCGCTGCACTATTTGAACATCATGAATCGACTGGTTTGCATC
CTT
CTGTTGGTGGTGGCCATGATTGGAGGTTTTGTGCACTCTGTGGTTCAAATTGTCTTTCTGTACAGTC
TA
CCAATCTGTGGCCCCAATGTTATTGACCACTCTGTCTGTGACATGTACCCATTGTTGGAACTGTTGTG
C
CTTGACACCTACTTTATAGGACTCACTGTGGTTGCCAATGGTGGAATAATTTGTATGGTCATCTTTACC
TTT
CTGCTAATCTCCTGTGGAGTCATCCTAAACTTCCTTAAAACTTACAGTCAGGAAGAGAGGCATAAAG
CC
CTGCCTACCTGCATCTCCCACATCATTGTGGTTGCCCTCGTTTTTGTTCCCTGTATTTTTATGTATGT
T
AGACCCGTTTCCAACTTTCCCTTTGATAAATTAATGACTGTGTTTTATTCAATTATCACACTCATGTTG
AAT
CCTTTAATATACTCGTTGAGACAATCAGAGATGAAAAATGCTATGAAAAATCTCTGGTGTGAAAAGT
TA
AGTATAGTTAGAAAAAGAGTATCTCCCACACTGAACATATTTATTCCTAGTTCTAAGGCAACAAATAG
G
CGGTAA


Translation (328 aa):
MRPSSNVTEFVLLGLTQDPDVKKTLFVMFLLIYIVTMVGNLLIWVTTIGSPSLGSLMYFFLAYLSLMDAI
Y
STAMSPKLMIDLLCDKIAISLSACMGQLFIEHLLGGAEVFLLVVMAYDRYVAISKPLHYLNIMNRLVCI
L
LLVVAMIGGFVHSVVQIVFLYSLPICGPNVIDHSVCDMYPLLELLCLDTYFIGLTVVANGGIICMVIFT
F
LLISCGVILNFLKTYSQEERHKALPTCISHIIVVALVFVPCIFMYVRPVSNFPFDKLMTVFYSIITLML
N
PLIYSLRQSEMKNAMKNLWCEKLSIVRKRVSPTLNIFIPSSKATNRR




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser