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Report for CCDS31544.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31544.1 Public Homo sapiens 11 OR9Q2 24 110 108 CCDS HistoryNCBI Gene:219957Re-query CCDS DB by CCDS ID:31544.1Re-query CCDS DB by GeneID:219957See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31544.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641291.1 ENSP00000492924.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641291.1Link to Ensembl Protein Viewer:ENSP00000492924.1Re-query CCDS DB by Nucleotide ID:ENST00000641291Re-query CCDS DB by Protein ID:ENSP00000492924
Original member Current member NCBI NM_001005283.3 NP_001005283.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005283.3Link to Protein Sequence:NP_001005283.1Re-query CCDS DB by Nucleotide ID:NM_001005283Re-query CCDS DB by Protein ID:NP_001005283Link to BLAST:NP_001005283.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005283.1 314 Q8NGE9 314 100% 0 0

Chromosomal Locations for CCDS 31544.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 58190491 58191435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGCTGAAAGGAATTACACCGTAGTGACGGAGTTCTTCCTTACTGCATTTACTGAACATCTCCAGTGGA
GGGTTCCTCTCTTCCTCATATTTTTGAGTTTCTATCTTGCCACTATGTTAGGGAACACAGGCATGATCCT
CCTGATCCGTGGCGATCGTCGGCTCCACACCCCGATGTACTTCTTCCTCAGCCACCTTTCCTTGGTGGAC
ATCTGCTACTCGTCCGCCATCATCCCTCAGATGCTGGCTGTGCTGTGGGAGCACGGCACAACCATCTCCC
AGGCTCGCTGTGCAGCTCAGTTCTTCCTCTTCACCTTCTTTGCCTCCATCGACTGCTACCTTCTGGCCAT
CATGGCCTATGACCGCTACACGGCCGTGTGCCAGCCCCTGCTTTATGTCACCATCATAACCGAGAAGGCC
CGCTGGGGCCTAGTCACTGGGGCTTACGTTGCTGGTTTTTTCAGTGCCTTTGTTCGAACGGTCACAGCCT
TCACTCTCTCCTTTTGTGGAAACAATGAGATCAACTTCATTTTCTGTGACCTCCCTCCTCTATTAAAACT
CTCCTGTGGGGACAGCTACACTCAGGAAGTGGTGATTATTGTGTTTGCTCTTTTCGTCATGCCTGCCTGT
ATCTTGGTGATCTTGGTATCCTACCTGTTTATCATTGTGGCCATCCTGCAGATCCACTCTGCTGGAGGCC
GGGCCAAGACCTTCTCCACCTGCGCCTCCCACCTCACTGCCGTCGCTCTTTTCTTTGGCACCCTCATCTT
CATGTACCTGCGAGACAACACAGGCCAGTCCTCCGAGGGAGACCGAGTGGTGTCTGTGCTCTACACGGTG
GTGACCCCAATGCTGAATCCCCTTATCTATAGCCTGAGAAACAAGGAGGTAAAAGAGGCCACTAGGAAAG
CCCTGAGCAAATCAAAGCCTGCTAGAAGACCCTAA

Translation (314 aa):
MAERNYTVVTEFFLTAFTEHLQWRVPLFLIFLSFYLATMLGNTGMILLIRGDRRLHTPMYFFLSHLSLVD
ICYSSAIIPQMLAVLWEHGTTISQARCAAQFFLFTFFASIDCYLLAIMAYDRYTAVCQPLLYVTIITEKA
RWGLVTGAYVAGFFSAFVRTVTAFTLSFCGNNEINFIFCDLPPLLKLSCGDSYTQEVVIIVFALFVMPAC
ILVILVSYLFIIVAILQIHSAGGRAKTFSTCASHLTAVALFFGTLIFMYLRDNTGQSSEGDRVVSVLYTV
VTPMLNPLIYSLRNKEVKEATRKALSKSKPARRP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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