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Report for CCDS31600.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31600.1 Public Homo sapiens 11 MEN1 24 110 108 CCDS HistoryNCBI Gene:4221Re-query CCDS DB by CCDS ID:31600.1Re-query CCDS DB by GeneID:4221See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31600.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312049.11 ENSP00000308975.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000312049.11Link to Ensembl Protein Viewer:ENSP00000308975.6Re-query CCDS DB by Nucleotide ID:ENST00000312049Re-query CCDS DB by Protein ID:ENSP00000308975
Original member Current member EBI ENST00000315422.9 ENSP00000323747.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000315422.9Link to Ensembl Protein Viewer:ENSP00000323747.4Re-query CCDS DB by Nucleotide ID:ENST00000315422Re-query CCDS DB by Protein ID:ENSP00000323747
Original member Current member EBI ENST00000377326.7 ENSP00000366543.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377326.7Link to Ensembl Protein Viewer:ENSP00000366543.3Re-query CCDS DB by Nucleotide ID:ENST00000377326Re-query CCDS DB by Protein ID:ENSP00000366543
Original member Current member EBI ENST00000450708.7 ENSP00000394933.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000450708.7Link to Ensembl Protein Viewer:ENSP00000394933.3Re-query CCDS DB by Nucleotide ID:ENST00000450708Re-query CCDS DB by Protein ID:ENSP00000394933
Original member Current member EBI ENST00000440873.6 ENSP00000413944.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000440873.6Link to Ensembl Protein Viewer:ENSP00000413944.2Re-query CCDS DB by Nucleotide ID:ENST00000440873Re-query CCDS DB by Protein ID:ENSP00000413944
Original member Current member NCBI NM_001370259.2 NP_001357188.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001370259.2Link to Protein Sequence:NP_001357188.2Re-query CCDS DB by Nucleotide ID:NM_001370259Re-query CCDS DB by Protein ID:NP_001357188Link to BLAST:NP_001357188.2
Original member Current member NCBI NM_001370260.2 NP_001357189.2 Accepted alive Link to Nucleotide Sequence:NM_001370260.2Link to Protein Sequence:NP_001357189.2Re-query CCDS DB by Nucleotide ID:NM_001370260Re-query CCDS DB by Protein ID:NP_001357189Link to BLAST:NP_001357189.2
Original member Current member NCBI NM_001370261.2 NP_001357190.2 Accepted alive Link to Nucleotide Sequence:NM_001370261.2Link to Protein Sequence:NP_001357190.2Re-query CCDS DB by Nucleotide ID:NM_001370261Re-query CCDS DB by Protein ID:NP_001357190Link to BLAST:NP_001357190.2
Original member Current member NCBI NM_130799.3 NP_570711.2 Accepted alive Link to Nucleotide Sequence:NM_130799.3Link to Protein Sequence:NP_570711.2Re-query CCDS DB by Nucleotide ID:NM_130799Re-query CCDS DB by Protein ID:NP_570711Link to BLAST:NP_570711.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001357188.2 610 O00255-2 610 100% 0 0
NP_001357189.2 610 O00255-2 610 100% 0 0
NP_001357190.2 610 O00255-2 610 100% 0 0
NP_570711.2 610 O00255-2 610 100% 0 0

Chromosomal Locations for CCDS 31600.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 64804334 64804816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64805034 64805198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64805635 64805770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64806232 64806368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64807011 64807098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64807179 64807219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64807552 64807680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64807891 64808099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64809665 64810109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1833 nt):
ATGGGGCTGAAGGCCGCCCAGAAGACGCTGTTCCCGCTGCGCTCCATCGACGACGTGGTGCGCCTGTTTG
CTGCCGAGCTGGGCCGAGAGGAGCCGGACCTGGTGCTCCTTTCCTTGGTGCTGGGCTTCGTGGAGCATTT
TCTGGCTGTCAACCGCGTCATCCCTACCAACGTTCCCGAGCTCACCTTCCAGCCCAGCCCCGCCCCCGAC
CCGCCTGGCGGCCTCACCTACTTTCCCGTGGCCGACCTGTCTATCATCGCCGCCCTCTATGCCCGCTTCA
CCGCCCAGATCCGAGGCGCCGTCGACCTGTCCCTCTATCCTCGAGAAGGGGGTGTCTCCAGCCGTGAGCT
GGTGAAGAAGGTCTCCGATGTCATATGGAACAGCCTCAGCCGCTCCTACTTCAAGGATCGGGCCCACATC
CAGTCCCTCTTCAGCTTCATCACAGGCACCAAATTGGACAGCTCCGGTGTGGCCTTTGCTGTGGTTGGGG
CCTGCCAGGCCCTGGGTCTCCGGGATGTCCACCTCGCCCTGTCTGAGGATCATGCCTGGGTAGTGTTTGG
GCCCAATGGGGAGCAGACAGCTGAGGTCACCTGGCACGGCAAGGGCAACGAGGACCGCAGGGGCCAGACA
GTCAATGCCGGTGTGGCTGAGCGGAGCTGGCTGTACCTGAAAGGATCATACATGCGCTGTGACCGCAAGA
TGGAGGTGGCGTTCATGGTGTGTGCCATCAACCCTTCCATTGACCTGCACACCGACTCGCTGGAGCTTCT
GCAGCTGCAGCAGAAGCTGCTCTGGCTGCTCTATGACCTGGGACATCTGGAAAGGTACCCCATGGCCTTA
GGGAACCTGGCAGATCTAGAGGAGCTGGAGCCCACCCCTGGCCGGCCAGACCCACTCACCCTCTACCACA
AGGGCATTGCCTCAGCCAAGACCTACTATCGGGATGAACACATCTACCCCTACATGTACCTGGCTGGCTA
CCACTGTCGCAACCGCAATGTGCGGGAAGCCCTGCAGGCCTGGGCGGACACGGCCACTGTCATCCAGGAC
TACAACTACTGCCGGGAAGACGAGGAGATCTACAAGGAGTTCTTTGAAGTAGCCAATGATGTCATCCCCA
ACCTGCTGAAGGAGGCAGCCAGCTTGCTGGAGGCGGGCGAGGAGCGGCCGGGGGAGCAAAGCCAGGGCAC
CCAGAGCCAAGGTTCCGCCCTCCAGGACCCTGAGTGCTTCGCCCACCTGCTGCGATTCTACGACGGCATC
TGCAAATGGGAGGAGGGCAGTCCCACGCCTGTGCTGCATGTGGGCTGGGCCACCTTTCTTGTGCAGTCCC
TAGGCCGTTTTGAGGGACAGGTGCGGCAGAAGGTGCGCATAGTGAGCCGAGAGGCCGAGGCGGCCGAGGC
CGAGGAGCCGTGGGGCGAGGAAGCCCGGGAAGGCCGGCGGCGGGGCCCACGGCGGGAGTCCAAGCCAGAG
GAGCCCCCGCCGCCCAAGAAGCCAGCACTGGACAAGGGCCTGGGCACCGGCCAGGGTGCAGTGTCAGGAC
CCCCCCGGAAGCCTCCTGGGACTGTCGCTGGCACAGCCCGAGGCCCTGAAGGTGGCAGCACGGCTCAGGT
GCCAGCACCCACAGCATCACCACCGCCGGAGGGTCCAGTGCTCACTTTCCAGAGTGAGAAGATGAAGGGC
ATGAAGGAGCTGCTGGTGGCCACCAAGATCAACTCGAGCGCCATCAAGCTGCAACTCACGGCACAGTCGC
AAGTGCAGATGAAGAAGCAGAAAGTGTCCACCCCTAGTGACTACACTCTGTCTTTCCTCAAGCGGCAGCG
CAAAGGCCTCTGA

Translation (610 aa):
MGLKAAQKTLFPLRSIDDVVRLFAAELGREEPDLVLLSLVLGFVEHFLAVNRVIPTNVPELTFQPSPAPD
PPGGLTYFPVADLSIIAALYARFTAQIRGAVDLSLYPREGGVSSRELVKKVSDVIWNSLSRSYFKDRAHI
QSLFSFITGTKLDSSGVAFAVVGACQALGLRDVHLALSEDHAWVVFGPNGEQTAEVTWHGKGNEDRRGQT
VNAGVAERSWLYLKGSYMRCDRKMEVAFMVCAINPSIDLHTDSLELLQLQQKLLWLLYDLGHLERYPMAL
GNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQD
YNYCREDEEIYKEFFEVANDVIPNLLKEAASLLEAGEERPGEQSQGTQSQGSALQDPECFAHLLRFYDGI
CKWEEGSPTPVLHVGWATFLVQSLGRFEGQVRQKVRIVSREAEAAEAEEPWGEEAREGRRRGPRRESKPE
EPPPPKKPALDKGLGTGQGAVSGPPRKPPGTVAGTARGPEGGSTAQVPAPTASPPPEGPVLTFQSEKMKG
MKELLVATKINSSAIKLQLTAQSQVQMKKQKVSTPSDYTLSFLKRQRKGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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