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Report for CCDS3161.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3161.2 Public Homo sapiens 3 AADACL2 24 110 108 CCDS HistoryNCBI Gene:344752Re-query CCDS DB by CCDS ID:3161.2Re-query CCDS DB by GeneID:344752See the combined annotation on chromosome 3 in Sequence Viewer

Public Note for CCDS 3161.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 3161.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356517.4 ENSP00000348911.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356517.4Link to Ensembl Protein Viewer:ENSP00000348911.3Re-query CCDS DB by Nucleotide ID:ENST00000356517Re-query CCDS DB by Protein ID:ENSP00000348911
Original member Current member NCBI NM_207365.4 NP_997248.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207365.4Link to Protein Sequence:NP_997248.2Re-query CCDS DB by Nucleotide ID:NM_207365Re-query CCDS DB by Protein ID:NP_997248Link to BLAST:NP_997248.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997248.2 401 Q6P093-1 401 100% 0 0

Chromosomal Locations for CCDS 3161.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 151734036 151734173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 151740646 151740868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 151744093 151744162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 151745509 151745680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 151756992 151757594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1206 nt):
ATGGGGCTAAAAGCTCTCTGTTTGGGGCTGCTTTGTGTTCTTTTTGTCTCTCATTTTTACACACCCATGC
CAGACAACATTGAAGAAAGCTGGAAAATAATGGCCTTGGATGCCATCGCTAAAACTTGTACATTTACGGC
TATGTGTTTTGAAAATATGCGTATTATGAGATATGAAGAGTTTATATCCATGATATTCAGGCTGGATTAT
ACCCAACCACTTTCAGATGAATACATCACAGTGACTGATACAACATTTGTTGACATTCCAGTACGATTGT
ACTTGCCAAAAAGAAAGTCAGAAACCCGAAGGCGAGCTGTGATATATTTTCATGGTGGTGGTTTTTGTTT
TGGAAGTTCCAAACAGAGGGCTTTTGACTTCCTGAATAGATGGACGGCAAACACGCTTGATGCTGTTGTT
GTAGGCGTGGACTATAGGCTGGCTCCTCAACACCACTTTCCTGCTCAGTTTGAAGATGGCCTTGCTGCAG
TCAAATTTTTTCTTTTGGAAAAAATTCTTACAAAATATGGAGTGGATCCCACCCGAATCTGCATTGCGGG
AGACAGTTCTGGGGGCAATTTAGCAACAGCGGTCACTCAACAGGTGCAGAATGATGCTGAAATAAAACAT
AAAATCAAGATGCAAGTCTTACTTTACCCTGGCTTACAGATAACAGATTCTTATTTGCCATCTCACCGAG
AAAATGAGCATGGTATAGTTTTGACCAGGGATGTAGCCATAAAACTCGTGAGCTTATATTTCACCAAGGA
TGAAGCACTTCCCTGGGCAATGAGAAGAAACCAACACATGCCTCTGGAGTCAAGACATCTGTTTAAGTTT
GTTAACTGGAGTATTCTTCTTCCTGAGAAGTATAGAAAAGACTATGTATATACTGAACCAATTCTTGGAG
GACTTAGTTATTCATTGCCAGGACTTACAGACAGCAGAGCATTACCCTTGTTGGCCAATGATTCTCAGTT
ACAGAATTTGCCACTAACCTATATTCTTACTTGTCAACATGATCTCTTAAGAGATGATGGACTTATGTAT
GTTACAAGACTTCGAAATGTTGGAGTCCAAGTTGTTCATGAACATATTGAGGATGGAATTCATGGAGCTT
TATCATTCATGACTTCACCATTTTATTTACGTCTAGGTCTTAGGATAAGAGATATGTATGTAAGTTGGCT
GGATAAGAATTTATAA

Translation (401 aa):
MGLKALCLGLLCVLFVSHFYTPMPDNIEESWKIMALDAIAKTCTFTAMCFENMRIMRYEEFISMIFRLDY
TQPLSDEYITVTDTTFVDIPVRLYLPKRKSETRRRAVIYFHGGGFCFGSSKQRAFDFLNRWTANTLDAVV
VGVDYRLAPQHHFPAQFEDGLAAVKFFLLEKILTKYGVDPTRICIAGDSSGGNLATAVTQQVQNDAEIKH
KIKMQVLLYPGLQITDSYLPSHRENEHGIVLTRDVAIKLVSLYFTKDEALPWAMRRNQHMPLESRHLFKF
VNWSILLPEKYRKDYVYTEPILGGLSYSLPGLTDSRALPLLANDSQLQNLPLTYILTCQHDLLRDDGLMY
VTRLRNVGVQVVHEHIEDGIHGALSFMTSPFYLRLGLRIRDMYVSWLDKNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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