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Report for CCDS31614.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31614.1 Public Homo sapiens 11 RIN1 24 110 108 CCDS HistoryNCBI Gene:9610Re-query CCDS DB by CCDS ID:31614.1Re-query CCDS DB by GeneID:9610See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31614.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311320.9 ENSP00000310406.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311320.9Link to Ensembl Protein Viewer:ENSP00000310406.4Re-query CCDS DB by Nucleotide ID:ENST00000311320Re-query CCDS DB by Protein ID:ENSP00000310406
Original member Current member NCBI NM_004292.3 NP_004283.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004292.3Link to Protein Sequence:NP_004283.2Re-query CCDS DB by Nucleotide ID:NM_004292Re-query CCDS DB by Protein ID:NP_004283Link to BLAST:NP_004283.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004283.2 783 Q13671-1 783 100% 0 0

Chromosomal Locations for CCDS 31614.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 66332276 66332752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66333258 66333409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66333527 66333658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66333919 66334224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66334514 66335251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66335407 66335498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66335610 66335682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66335762 66335876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66335978 66336158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66336317 66336402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2352 nt):
ATGGAAAGCCCTGGAGAGTCAGGCGCGGGCTCTCCTGGAGCCCCCAGCCCGTCCAGCTTCACTACTGGGC
ACCTGGCGAGAGAAAAGCCAGCCCAGGACCCACTGTATGACGTGCCCAATGCCAGCGGCGGGCAGGCAGG
CGGGCCGCAGCGGCCGGGGCGCGTTGTGAGCCTGCGGGAGCGCCTGCTGCTCACCCGGCCCGTGTGGCTG
CAGCTGCAAGCCAACGCAGCGGCCGCACTGCACATGCTGAGGACCGAGCCCCCGGGGACGTTCCTCGTGC
GGAAATCTAACACCCGCCAGTGCCAGGCCCTGTGCATGCGGTTGCCTGAAGCCAGTGGCCCCTCCTTCGT
CTCCAGCCACTACATCCTGGAGAGCCCTGGCGGCGTCTCCTTGGAGGGCTCGGAGCTCATGTTCCCAGAC
CTAGTCCAGCTCATCTGTGCCTACTGCCACACCCGGGACATCCTTCTCCTCCCGCTGCAGCTCCCCAGAG
CCATCCACCACGCAGCCACTCACAAAGAGCTGGAGGCCATCTCCCATCTGGGCATTGAGTTCTGGAGCTC
CTCCCTCAACATCAAGGCTCAGCGGGGCCCGGCTGGAGGCCCAGTGTTGCCCCAGCTGAAGGCCCGGTCC
CCTCAAGAGCTGGACCAGGGCACCGGAGCCGCCTTGTGCTTCTTCAACCCCCTGTTCCCGGGGGACCTAG
GGCCCACCAAGCGGGAGAAATTCAAGAGAAGCTTCAAAGTGCGCGTGTCCACAGAGACCTCCAGCCCCCT
GTCTCCACCTGCCGTGCCACCTCCCCCCGTCCCCGTGCTGCCAGGGGCAGTCCCCAGCCAGACAGAGCGG
CTGCCCCCTTGCCAGCTGCTACGGAGGGAGAGCTCAGTGGGGTACCGCGTGCCAGCAGGCAGTGGCCCTA
GCCTTCCGCCTATGCCCTCCCTCCAAGAGGTGGACTGCGGCTCCCCCAGCAGCTCCGAGGAGGAGGGGGT
GCCAGGGTCCCGGGGGAGCCCAGCGACCTCACCCCACCTGGGCCGCCGACGACCTCTGCTTCGGTCCATG
AGCGCCGCCTTCTGCTCCCTACTGGCACCGGAGCGGCAGGTGGGCCGGGCTGCGGCAGCACTGATGCAGG
ACCGACACACAGCCGCGGGCCAGCTGGTGCAGGACCTACTGACCCAGGTGCGGGCTGGGCCCGAGCCCCA
GGAGCTGCAGGGCATCCGTCAGGCGCTGAGCCGGGCCCGGGCCATGCTGAGTGCGGAGCTGGGCCCTGAG
AAGCTGCTGTCGCCTAAGAGGCTGGAACATGTCCTGGAGAAGTCATTGCATTGCTCTGTGCTCAAGCCTC
TCCGGCCCATCCTGGCAGCCCGCCTGCGGCGCCGGCTTGCCGCAGACGGCTCCCTGGGCCGCCTAGCTGA
GGGCCTCCGCCTGGCCCGGGCCCAGGGCCCCGGAGCCTTCGGGTCCCACCTGAGCCTGCCCTCCCCAGTA
GAGTTGGAGCAAGTGCGCCAGAAGCTGCTGCAGCTGCTCCGCACCTACTCACCCAGCGCCCAGGTCAAGC
GGCTCCTGCAGGCCTGCAAGCTGCTCTACATGGCCCTGAGGACCCAGGAAGGGGAGGGCGCGGGTGCCGA
CGAGTTCCTGCCTCTGCTGAGCCTCGTCTTGGCCCACTGTGACCTTCCTGAGCTGCTGCTGGAGGCCGAG
TACATGTCGGAGCTGCTGGAGCCCAGCCTGCTTACTGGAGAGGGTGGCTACTACCTGACCAGCCTCTCTG
CCAGCCTGGCCCTGCTGAGTGGCCTGGGTCAGGCCCACACCCTCCCACTGAGCCCCGTGCAGGAGCTACG
GCGCTCCCTCAGCCTCTGGGAGCAGCGCCGCCTGCCTGCCACCCACTGCTTCCAGCACCTCCTCCGAGTA
GCCTATCAGGATCCCAGCAGTGGCTGCACCTCCAAGACCCTGGCCGTGCCCCCAGAAGCCTCGATTGCCA
CCCTGAACCAGCTCTGTGCCACCAAGTTCCGAGTGACCCAGCCCAACACTTTTGGCCTCTTCCTGTACAA
GGAGCAGGGCTACCACCGCCTGCCCCCTGGGGCCCTGGCCCACAGGCTGCCCACCACTGGCTACCTCGTC
TACCGCCGGGCGGAGTGGCCTGAGACCCAGGGGGCTGTGACAGAGGAGGAGGGCAGTGGGCAGTCAGAGG
CAAGAAGCAGAGGGGAGGAGCAAGGGTGCCAGGGAGATGGGGATGCTGGGGTCAAAGCCAGCCCCAGGGA
CATTCGGGAACAGTCTGAGACAACTGCTGAAGGGGGCCAGGGTCAAGCCCAGGAAGGCCCTGCTCAGCCA
GGGGAACCAGAGGCAGAGGGAAGCCGGGCAGCAGAGGAGTAG

Translation (783 aa):
MESPGESGAGSPGAPSPSSFTTGHLAREKPAQDPLYDVPNASGGQAGGPQRPGRVVSLRERLLLTRPVWL
QLQANAAAALHMLRTEPPGTFLVRKSNTRQCQALCMRLPEASGPSFVSSHYILESPGGVSLEGSELMFPD
LVQLICAYCHTRDILLLPLQLPRAIHHAATHKELEAISHLGIEFWSSSLNIKAQRGPAGGPVLPQLKARS
PQELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLPGAVPSQTER
LPPCQLLRRESSVGYRVPAGSGPSLPPMPSLQEVDCGSPSSSEEEGVPGSRGSPATSPHLGRRRPLLRSM
SAAFCSLLAPERQVGRAAAALMQDRHTAAGQLVQDLLTQVRAGPEPQELQGIRQALSRARAMLSAELGPE
KLLSPKRLEHVLEKSLHCSVLKPLRPILAARLRRRLAADGSLGRLAEGLRLARAQGPGAFGSHLSLPSPV
ELEQVRQKLLQLLRTYSPSAQVKRLLQACKLLYMALRTQEGEGAGADEFLPLLSLVLAHCDLPELLLEAE
YMSELLEPSLLTGEGGYYLTSLSASLALLSGLGQAHTLPLSPVQELRRSLSLWEQRRLPATHCFQHLLRV
AYQDPSSGCTSKTLAVPPEASIATLNQLCATKFRVTQPNTFGLFLYKEQGYHRLPPGALAHRLPTTGYLV
YRRAEWPETQGAVTEEEGSGQSEARSRGEEQGCQGDGDAGVKASPRDIREQSETTAEGGQGQAQEGPAQP
GEPEAEGSRAAEE


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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