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Report for CCDS31658.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31658.1 Public Homo sapiens 11 CEP126 24 110 108 CCDS HistoryNCBI Gene:57562Re-query CCDS DB by CCDS ID:31658.1Re-query CCDS DB by GeneID:57562See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31658.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263468.13 ENSP00000263468.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263468.13Link to Ensembl Protein Viewer:ENSP00000263468.8Re-query CCDS DB by Nucleotide ID:ENST00000263468Re-query CCDS DB by Protein ID:ENSP00000263468
Original member Current member NCBI NM_020802.4 NP_065853.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020802.4Link to Protein Sequence:NP_065853.3Re-query CCDS DB by Nucleotide ID:NM_020802Re-query CCDS DB by Protein ID:NP_065853Link to BLAST:NP_065853.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065853.3 1117 Q9P2H0 1117 100% 0 0

Chromosomal Locations for CCDS 31658.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 101915285 101915412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101922641 101922760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101944265 101944410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101948031 101948142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101958168 101958366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101961741 101963880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101978347 101978459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101981889 101981964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101986832 101987041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101992778 101992842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101997599 101997643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3354 nt):
ATGCTGGCGGGGAGGCCCGGAACCCGGAGCGCGGTCGGGGAACTGGGCACTGAATCATCGGACAACCTCG
AC
AGAGCCCCCCTCGGCCCTCGGGAGAGCGGCGGGCATCACCGACCTGGCTCTTACCTAGATATGAAAAT
C
CATCTGGAGAAAAATTTAGAAGAAGAGCGCCAGATATTACTGCAGCAACAAAAAATATGTCGAAATCGA
GCA
CGTAAATATTTTGTGGAGTCAAATCGGAGAAAAAAAGCTTTTGAGGAGAAACGAAAAGAACAGGAAG
AA
AAAGAACACCAAATTAGAGAACAAATACTTCAACAAAGAAAACAGAAGTTTGAAGAAGTTACTGAAAA
A
TTCCAGCGTGCCCATGTTCCTCTTTCACAGCGGAGGAAAGCAGTTTCCCGAAAACCAGTTCCTCCATTA
GAA
GAGGCCCTCAAACAAATTCAGGAATCCAACTTAAAATCAGAAGTAAACCTTCCCTTTTCCCGTAGAC
CA
ACAATAAACTGGAGAGCTATAGATTCTGCCTTGCCTTCCGCATTATCAAAAAATGATCACAAGCATCA
G
AAACAACTCTTATCCAAAATCAATTGTGAGAAAGAAATGAATGAAAACATGAGGGCAACCTTGGCTACT
AGC
AAAAATGTGTTCCAGCTTAAACTGGAGGAAACTCAGAAACTCCTCGAAGATCAACATCTAAGCAATT
TG
CAAAAATTTTGTGATGAAGTTAATCAGATAACCAATTCTGAAACCCTCTCAAGTATAGACAGTCTTGA
G
GCTACAGAGCATGAAGAAATATATTTAACACTTAATAAGGAGCATTCCACATCCATCCAGCGGAATACC
ATT
TCCCTCAAACCAGCAAATATGCAATCAACTAATCTCAGCTGCTTTGATGAAGATAAACTGGCATTCT
CT
AAAACTCAACATATAAATAATTGGCTTACAAATTTAGATGCTTCAAATACTCAGAATGTCACAGCTTT
C
TCAGATATTTTAAGTAAATCTAATGTTCTGCCTTCATGGGAATATTTTAATAGTAAAGAACAAAATCCA
TCT
CCTTTGAATGGAACAGTGGAAAGAGCCACAAATACTGCTAATAATTCAGTACCCTTTGTATCTAGCC
CA
CCCATGTTTGTACTAGATAAAAAATGTGAAAAGACCTCTGAAACTAGCACTATGAGGACAACTGACTC
C
ACTTCTGGAGCATTCAAAAGAGAGAGACCATTAGTTACTGAGAGCCCAACATTTAAATTTAGCAAATCC
CAA
AGCACTTCAGATTCTCTAACCCAGGAAGTGGCTACATTTCCAGACCAAGAGAAATATTCTGAATTAA
AT
CAAGAAAATGGAACTACTTCAATTCCTACTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATC
T
AATATACAGTCAGCTAGACCTTCAGCAAAGAACAGTATACACATAAAAGAAATTGATGCAGTGCAGTGT
TCT
GATAAGTTAGATGAATTGAAAGATGGTAAAGAAGAAGAGATAAAATATTTTAATTGCAATAAGGAAG
AG
TTGCCTTTATTTTCAGACAGTTTTCAAGATGCCTATATACCTCACAATCCTGATTCAAAAGATGAAAA
A
CAAAAATTAGCTGAAACATCATCCTTGTCTAATGTAACTTCTAATTATGACTTTGTTGGCCAGCATAAG
AAA
ATGAAATACAACATCCATGAGAGAAATGGTGTGAGATTTCTTAAAAGTATTTTAAAGAAAGAATCTA
AA
TATGAACATGGTTATCTTAAGGCATTAATTATAAATCAGAGCTTTAAGTTTGGAAATCAAAAAGCAGC
A
GCTATCAGAGATAGTATTGAATTAACAAAGGAAAAAGGTGCAGAAATTCCAAAGACCATTAAAAAACTG
AGG
TGGTTTGATGAAACTAGCAATATAGAAAACAATGCTGAAAACAGTCATTCACTGAAGAATAAAACAG
GA
ACAACTCAACAGCATTCTCAACAATTCCACATTCAAAGTGGTGCTGGAAGCAACATAATTAGTGTTTC
T
ACTTGTGCTGTAAATTCTGCTGATACAAAGAAGTCCAGGGAGGATTCTATCTCTGAAAATGTTACGACT
TTA
GGAGGATCTGGAGCAGACCATATGCCTTTGAACTGTTTTATACCTTCAGGTTATAACTTTGCTAAAC
AT
GCCTGGCCAGCCTCAAAAAAAGAAGAAAGTAAAATCCCTGTACATGATGATTCTAAAACTAAGCAAGG
T
AAGCCACAAAGAGGTAGAGCAAAAATAATTAGAAAACCAGGATCTGCAAAAGTCCAATCAGGCTTTATA
TGT
ACAAACAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGCAAAGTCAACATATTTACACAAGCTC
AG
GGAAAATTAATTATACCTTGTCCTCCTCCTCAATCTACATCAAATATTAGAAGTGGTAAAAATATACA
A
GTGTCTCAGTGTCAACCAGTAACTCCTGAAAATCCTCAAAACATTATTACACATAACTCTTTTAATTCA
AAA
CATGTGCTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATG
CT
TGTTCTGACCTAGTCACTGTGATACCATCACTGCCATCATATTGTTCTTCAGAGTGCCAAACTTTCGC
A
AAAATAAATCATTCAAATGGCACTCAAGCAGTTGCCCGGCAAGATGCGACATTATATTGCACCCAAAGA
AGT
CCTGTTTGTGAAGAAAGTTATCCGTCTGTGACTCTAAGAACTGCTGAAGAAGAATCAGTTCCCTTAT
GG
AAAAGAGGTCCTAATGTCCTGCATCAAAATAAGAGGGCTACAGGGTCTACTGTTATGAGAAGAAAACG
A
ATTGCTGAAACTAAGCGGAGAAATATTTTAGAGCAGAAAAGACAAAACCCTGGATCTGTAGGACAGAAG
TAC
AGTGAGCAAATTAATAATTTTGGACAAAGTGTCCTGCTAAGTTCAAGTGAGCCAAAACAAACTACAA
GG
GGTACTTCTTATATTGAAGAAGTTTCAGATAGTACTTCTGAGTTTTTGATGGCTGAAAACTTAGTGAA
A
GCATCAGTGCCGGAGGATGAGATTCTGACTGTCTTGAATAGCAAACAGATACAGAAATCAAATCTACCT
TTA
AATAAAACTCAACAATTCAACATCTGCACACTGTCAGCTGAAGAACAGAAGATCCTAGAGTCCCTTA
AT
GATCTCAGTGAAAGACTACATTATATACAAGAATCCATTTGCAAAAACCCATCCATCAAAAATACTTT
A
CAAATAATACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATAA


Translation (1117 aa):
MLAGRPGTRSAVGELGTESSDNLDRAPLGPRESGGHHRPGSYLDMKIHLEKNLEEERQILLQQQKICRNR
A
RKYFVESNRRK
KAFEEKRKEQEEKEHQIREQILQQRKQKFEEVTEKFQRAHVPLSQRRKAVSRKPVPPL
E
EALKQIQESNLKSEVNLPFSRRPTINW
RAIDSALPSALSKNDHKHQKQLLSKINCEKEMNENMRATLAT
S
KNVFQLKLEETQKLLEDQHLSNLQ
KFCDEVNQITNSETLSSIDSLEATEHEEIYLTLNKEHSTSIQRNT
I
SLKPANMQSTNLSCFDEDKLAFSKTQHINNWLTNLDASNTQNVTAFSDILSKSNVLPSWEYFNSKEQNP
S
PLNGTVERATNTANNSVPFVSSPPMFVLDKKCEKTSETSTMRTTDSTSGAFKRERPLVTESPTFKFSKS
Q
STSDSLTQEVATFPDQEKYSELNQENGTTSIPTSCVPVATPLVLPSNIQSARPSAKNSIHIKEIDAVQC
S
DKLDELKDGKEEEIKYFNCNKEELPLFSDSFQDAYIPHNPDSKDEKQKLAETSSLSNVTSNYDFVGQHK
K
MKYNIHERNGVRFLKSILKKESKYEHGYLKALIINQSFKFGNQKAAAIRDSIELTKEKGAEIPKTIKKL
R
WFDETSNIENNAENSHSLKNKTGTTQQHSQQFHIQSGAGSNIISVSTCAVNSADTKKSREDSISENVTT
L
GGSGADHMPLNCFIPSGYNFAKHAWPASKKEESKIPVHDDSKTKQGKPQRGRAKIIRKPGSAKVQSGFI
C
TNRKGAVIQPQSASKVNIFTQAQGKLIIPCPPPQSTSNIRSGKNIQVSQCQPVTPENPQNIITHNSFNS
K
HVLPTEHSLNQWNQESSSPLSNACSDLVTVIPSLPSYCSSECQTFAKINHSNGTQAVARQDATLYCTQR
S
PVCEESYPSVTLRTAEEESVPLWKRGPNVLHQNKRAT
GSTVMRRKRIAETKRRNILEQKRQNPGSVGQK
Y
SEQIN
NFGQSVLLSSSEPKQTTRGTSYIEEVSDSTSEFLMAENLVKASVPEDEILTVLNSKQIQKSNLP
L
NKTQQFNICTLSAEEQKILESLNDLSERLH
YIQESICKNPSIKNTLQIIPLLEKREDRTSSCRDKR



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser