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Report for CCDS31687.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31687.1 Public Homo sapiens 11 TTC36 24 110 108 CCDS HistoryNCBI Gene:143941Re-query CCDS DB by CCDS ID:31687.1Re-query CCDS DB by GeneID:143941See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31687.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302783.10 ENSP00000307640.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302783.10Link to Ensembl Protein Viewer:ENSP00000307640.4Re-query CCDS DB by Nucleotide ID:ENST00000302783Re-query CCDS DB by Protein ID:ENSP00000307640
Original member Current member NCBI NM_001080441.4 NP_001073910.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080441.4Link to Protein Sequence:NP_001073910.1Re-query CCDS DB by Nucleotide ID:NM_001080441Re-query CCDS DB by Protein ID:NP_001073910Link to BLAST:NP_001073910.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073910.1 189 A6NLP5-1 189 100% 0 0

Chromosomal Locations for CCDS 31687.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 118527495 118527612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118528603 118528791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 118530654 118530916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (570 nt):
ATGGGGACTCCAAATGATCAGGCAGTGCTGCAGGCCATCTTCAACCCTGACACCCCATTTGGAGACATTG
TTGGATTGGACCTCGGAGAGGAAGCAGAAAAGGAAGAACGAGAAGAAGATGAAGTTTTCCCTCAAGCACA
GCTGGAACAGTCCAAGGCCCTGGAGCTGCAGGGGGTGATGGCAGCAGAGGCTGGGGACCTCAGCACAGCC
CTGGAGAGGTTTGGCCAAGCCATCTGCCTGCTGCCTGAGAGGGCTTCAGCCTACAACAACCGTGCCCAGG
CCCGGCGACTCCAGGGAGACGTGGCAGGCGCCCTGGAGGATCTGGAACGCGCGGTGGAGCTGAGCGGCGG
CCGGGGCCGCGCCGCCCGCCAGAGCTTTGTGCAGCGCGGACTCCTGGCGCGGCTGCAGGGCCGAGACGAC
GACGCCCGCAGGGACTTCGAGAGGGCGGCACGGCTGGGCAGCCCCTTCGCGCGGCGCCAGCTGGTGCTGC
TCAACCCCTACGCCGCGCTGTGCAACCGCATGCTGGCCGACATGATGGGGCAGCTGCGCCGCCCCCGTGA
CAGCCGCTGA

Translation (189 aa):
MGTPNDQAVLQAIFNPDTPFGDIVGLDLGEEAEKEEREEDEVFPQAQLEQSKALELQGVMAAEAGDLSTA
LERFGQAICLLPERASAYNNRAQARRLQGDVAGALEDLERAVELSGGRGRAARQSFVQRGLLARLQGRDD
DARRDFERAARLGSPFARRQLVLLNPYAALCNRMLADMMGQLRRPRDSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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