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Report for CCDS31696.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31696.1 Public Homo sapiens 11 OR6M1 24 110 108 CCDS HistoryNCBI Gene:390261Re-query CCDS DB by CCDS ID:31696.1Re-query CCDS DB by GeneID:390261See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31696.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309154.3 ENSP00000311038.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309154.3Link to Ensembl Protein Viewer:ENSP00000311038.2Re-query CCDS DB by Nucleotide ID:ENST00000309154Re-query CCDS DB by Protein ID:ENSP00000311038
Original member Current member NCBI NM_001005325.1 NP_001005325.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005325.1Link to Protein Sequence:NP_001005325.1Re-query CCDS DB by Nucleotide ID:NM_001005325Re-query CCDS DB by Protein ID:NP_001005325Link to BLAST:NP_001005325.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005325.1 313 Q8NGM8 313 100% 0 0

Chromosomal Locations for CCDS 31696.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 123805408 123806349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGGGAAACTGGAGCACTGTGACTGAAATCACCCTAATTGCCTTCCCAGCTCTCCTGGAGATTCGAATAT
CTCTCTTCGTGGTTCTTGTGGTAACTTACACATTAACAGCAACAGGAAACATCACCATCATCTCCCTGAT
ATGGATTGATCATCGCCTGCAAACTCCAATGTACTTCTTCCTCAGTAATTTGTCCTTTCTGGATATCTTA
TACACCACTGTCATTACCCCAAAGTTGTTGGCCTGCCTCCTAGGAGAAGAGAAAACCATATCTTTTGCTG
GTTGCATGATCCAAACATATTTCTACTTCTTTCTGGGGACGGTGGAGTTTATCCTCTTGGCGGTGATGTC
CTTTGACCGCTACATGGCTATCTGCGACCCACTGCACTACACGGTCATCATGAACAGCAGGGCCTGCCTT
CTGCTGGTTCTGGGATGCTGGGTGGGAGCCTTCCTGTCTGTGTTGTTTCCAACCATTGTAGTGACAAGGC
TACCTTACTGTAGGAAAGAAATTAATCATTTCTTCTGTGACATTGCCCCTCTTCTTCAGGTGGCCTGTAT
AAATACTCACCTCATTGAGAAGATAAACTTTCTCCTCTCTGCCCTTGTCATCCTGAGCTCCCTGGCATTC
ACTACTGGGTCCTACGTGTACATAATTTCTACCATCCTGCGTATCCCCTCCACCCAGGGCCGTCAGAAAG
CTTTTTCTACCTGTGCTTCTCACATCACTGTTGTCTCCATTGCCCACGGGAGCAACATCTTTGTGTATGT
GAGACCCAATCAGAACTCCTCACTGGATTATGACAAGGTGGCCGCTGTCCTCATCACAGTGGTGACCCCT
CTCCTGAACCCTTTTATCTACAGCTTGAGGAATGAGAAGGTACAGGAAGTGTTGAGAGAGACAGTGAACA
GAATCATGACCTTGATACAAAGGAAAACTTGA

Translation (313 aa):
MGNWSTVTEITLIAFPALLEIRISLFVVLVVTYTLTATGNITIISLIWIDHRLQTPMYFFLSNLSFLDIL
YTTVITPKLLACLLGEEKTISFAGCMIQTYFYFFLGTVEFILLAVMSFDRYMAICDPLHYTVIMNSRACL
LLVLGCWVGAFLSVLFPTIVVTRLPYCRKEINHFFCDIAPLLQVACINTHLIEKINFLLSALVILSSLAF
TTGSYVYIISTILRIPSTQGRQKAFSTCASHITVVSIAHGSNIFVYVRPNQNSSLDYDKVAAVLITVVTP
LLNPFIYSLRNEKVQEVLRETVNRIMTLIQRKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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