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Report for CCDS31732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31732.1 Public Homo sapiens 12 ZNF384 24 110 108 CCDS HistoryNCBI Gene:171017Re-query CCDS DB by CCDS ID:31732.1Re-query CCDS DB by GeneID:171017See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31732.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355772.8 ENSP00000348018.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000355772.8Link to Ensembl Protein Viewer:ENSP00000348018.4Re-query CCDS DB by Nucleotide ID:ENST00000355772Re-query CCDS DB by Protein ID:ENSP00000348018
Original member Current member NCBI NM_001039920.3 NP_001035009.1 Accepted alive Link to Nucleotide Sequence:NM_001039920.3Link to Protein Sequence:NP_001035009.1Re-query CCDS DB by Nucleotide ID:NM_001039920Re-query CCDS DB by Protein ID:NP_001035009Link to BLAST:NP_001035009.1
Original member Current member NCBI NM_001385798.1 NP_001372727.1 Accepted alive Link to Nucleotide Sequence:NM_001385798.1Link to Protein Sequence:NP_001372727.1Re-query CCDS DB by Nucleotide ID:NM_001385798Re-query CCDS DB by Protein ID:NP_001372727Link to BLAST:NP_001372727.1
Original member Current member NCBI NM_001385799.1 NP_001372728.1 Accepted alive Link to Nucleotide Sequence:NM_001385799.1Link to Protein Sequence:NP_001372728.1Re-query CCDS DB by Nucleotide ID:NM_001385799Re-query CCDS DB by Protein ID:NP_001372728Link to BLAST:NP_001372728.1
Original member Current member NCBI NM_001385800.1 NP_001372729.1 Accepted alive Link to Nucleotide Sequence:NM_001385800.1Link to Protein Sequence:NP_001372729.1Re-query CCDS DB by Nucleotide ID:NM_001385800Re-query CCDS DB by Protein ID:NP_001372729Link to BLAST:NP_001372729.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035009.1 461 Q8TF68-3 461 100% 0 0
NP_001372727.1 461 Q8TF68-3 461 100% 0 0
NP_001372728.1 461 Q8TF68-3 461 100% 0 0
NP_001372729.1 461 Q8TF68-3 461 100% 0 0

Chromosomal Locations for CCDS 31732.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 6667714 6668115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6669031 6669189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6670760 6670838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6673216 6673440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6678127 6678343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6678946 6679183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 6679455 6679520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1386 nt):
ATGGAAGAATCTCACTTCAATTCTAACCCGTACTTCTGGCCTTCTATCCCCACAGTCTCAGGTCAGATCG
AGAACACAATGTTCATCAACAAGATGAAGGATCAGCTGTTGCCAGAGAAGGGCTGTGGTCTGGCCCCACC
TCACTACCCCACCTTGCTGACAGTGCCTGCCTCAGTGTCCCTGCCCTCAGGCATCAGTATGGACACAGAG
TCCAAGTCAGACCAGCTGACCCCACACAGCCAAGCGTCCGTTACCCAGAATATCACGGTGGTCCCTGTGC
CGTCTACAGGACTGATGACTGCTGCCCTGCAGGTTGTCCCTGACCTCTCCAAGAAGGTAGCATCGACCCT
AACCGAGGAAGGAGGCGGAGGTGGTGGTGGAGGTGGCAGTGTGGCTCCTAAGCCACCCCGGGGCCGGAAG
AAGAAGCGGATGCTGGAATCAGGGCTGCCCGAGATGAATGACCCTTATGTCCTCTCCCCTGAGGATGATG
ATGACCATCAGAAAGACGGCAAGACCTACAGGTGCCGGATGTGCTCACTGACATTCTACTCCAAGTCGGA
GATGCAGATCCACTCCAAGTCACACACCGAGACCAAGCCCCACAAGTGCCCACATTGCTCCAAGACCTTC
GCCAACAGCTCCTACCTGGCCCAGCACATCCGTATACACTCAGGGGCTAAGCCCTACAGTTGTAACTTCT
GTGAGAAATCCTTCCGCCAGCTCTCCCACCTTCAGCAGCACACCCGAATCCACACTGGTGATAGACCATA
CAAATGTGCACACCCAGGCTGTGAGAAAGCCTTCACACAACTCTCCAATCTGCAGTCCCACAGACGGCAA
CACAACAAAGATAAACCCTTCAAGTGCCACAACTGTCATCGGGCGTACACGGATGCAGCCTCACTAGAGG
TGCACCTGTCTACGCACACAGTGAAGCATGCCAAGGTGTACACCTGCACTATCTGCAGTCGGGCATACAC
ATCAGAAACATACCTTATGAAACATATGCGCAAACACAACCCGCCTGATCTTCAGCAACAGGTGCAGGCA
GCAGCAGCAGCGGCAGCAGTGGCCCAGGCCCAGGCTCAAGCTCAAGCCCAGGCTCAGGCTCAGGCTCAAG
CCCAGGCCCAGGCCCAGGCCTCCCAGGCATCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAACAGCCACCACCACACTTCCAGTCTCCTGGGGCAGCCCCCCAGGGTGGGGGTGGTGGGGACAGC
AATCCCAACCCTCCACCCCAGTGTTCCTTTGACCTGACCCCGTATAAGACGGCGGAGCATCATAAGGACA
TCTGCCTCACTGTCACCACCAGCACCATCCAGGTGGAGCACCTGGCCAGCTCTTAG

Translation (461 aa):
MEESHFNSNPYFWPSIPTVSGQIENTMFINKMKDQLLPEKGCGLAPPHYPTLLTVPASVSLPSGISMDTE
SKSDQLTPHSQASVTQNITVVPVPSTGLMTAALQVVPDLSKKVASTLTEEGGGGGGGGGSVAPKPPRGRK
KKRMLESGLPEMNDPYVLSPEDDDDHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTF
ANSSYLAQHIRIHSGAKPYSCNFCEKSFRQLSHLQQHTRIHTGDRPYKCAHPGCEKAFTQLSNLQSHRRQ
HNKDKPFKCHNCHRAYTDAASLEVHLSTHTVKHAKVYTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQA
AAAAAAVAQAQAQAQAQAQAQAQAQAQAQASQASQQQQQQQQQQQQQQQQPPPHFQSPGAAPQGGGGGDS
NPNPPPQCSFDLTPYKTAEHHKDICLTVTTSTIQVEHLASS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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