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Report for CCDS31759.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31759.2 Public Homo sapiens 12 DNAI7 24 110 108 CCDS HistoryNCBI Gene:55259Re-query CCDS DB by CCDS ID:31759.2Re-query CCDS DB by GeneID:55259See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 31759.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395987.8 ENSP00000379310.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395987.8Link to Ensembl Protein Viewer:ENSP00000379310.3Re-query CCDS DB by Nucleotide ID:ENST00000395987Re-query CCDS DB by Protein ID:ENSP00000379310
Original member Current member NCBI NM_018272.5 NP_060742.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018272.5Link to Protein Sequence:NP_060742.4Re-query CCDS DB by Nucleotide ID:NM_018272Re-query CCDS DB by Protein ID:NP_060742Link to BLAST:NP_060742.4

Chromosomal Locations for CCDS 31759.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 25108548 25108823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25110127 25110240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25111772 25111939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25114656 25114870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25119145 25119301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25121753 25121913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25123211 25123286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25144365 25144677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25147001 25147104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25149628 25149774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25154319 25154456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25155311 25155412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25158472 25158563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25161113 25161197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25190614 25190631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25195076 25195078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2169 nt):
ATGGGTCCCAAAGCAAAAAAGTCTGGCAGTAAGAAAAAGAAAGTCACCAAAGCTGAACGATTGAAGCTGC
TACAAGAGGAGGAGGAGAGACGACTGAAAGAGGAAGAGGAAGCCCGTTTGAAATATGAGAAAGAAGAAAT
GGAAAGGCTTGAAATACAGCGAATTGAGAAAGAAAAATGGCATCGACTTGAAGCAAAAGATCTAGAAAGG
AGAAATGAAGAACTTGAAGAACTTTATTTATTAGAGAGGTGTTTTCCTGAAGCAGAGAAATTGAAACAGG
AAACTAAATTGCTTTCTCAGTGGAAGCACTACATTCAATGTGATGGGAGTCCTGATCCTTCAGTAGCCCA
AGAAATGAACACGTTTATTAGTTTGTGGAAAGAGAAAACAAATGAGACTTTTGAGGAAGTGATTGAGAAG
AGTAAAGTAGTGCTAAATTTAATTGAGAAATTGAAATTTATTTTACTGGAAACTCCACCATGTGATTTGC
AAGATAAAAATATAATACAGTACCAAGAATCAATACTACAACTGCAGGAGCTCCTTCATCTTAAATTCGG
TGTAGCCACAGAAATACTTCTCAAACAAGCTAGTACTTTGGCAGATCTGGACAGTGGAAATATGGAAAAA
GTCATTAAAGATGAAAATGTTACTCTGTATGTGTGGGCAAACCTCAAGAAGAATCCAAGGCACAGAAGTG
TTAGATTCTCTGAAACACAAATTGGATTTGAGATTCCAAGGATATTAGCAACAAGTGACATTGCTGTACG
ACTCCTGCATACCCACTATGATCATGTTTCTGCACTGCACCCTGTTTCAACACCATCAAAAGAATACACT
TCTGCAGTAACTGAGCTTGTCAAAGATGATGTTAAGAATGTAGAAAAAGCAATCAGCAAGGAGGTCGAAG
AAGAGTCCAAACAACAAGAAAGAGGGTCTCACTTAATTCAGGAGGAAGAAATAAAAGTTGAGGAGGAACA
AGGTGATATTGAAGTGAAAATGAGTTCTGCTGAGGAAGAATCTGAAGCCATAAAATGTGAACGAGAGATG
AAAGTATTAAGTGAAACTGTTTCAGCAGCACAGTTGTTGCTGGTAGAGAATTCTTCTGAAAAGCCAGATT
TCTTTGAAGACAATGTGGTGGATTTATGCCAGTTCACAACTCTGGGTGGAGTATACCACTTGGATATTTT
GGAGCTTCCTCCACAGTGTAAACCAGTGAAGGGATGGATGATTGTGGAAATACTCAAAGAAGGATTACAG
AAATACACATATCCTCCGGAAACTACAGAAGAGTTTGAGACAGAAAATGCTTTCCCACCTATAGAGGTCA
CACTTGAGGTTCATGAGAATGTAATCTTTTTTGAGGATCCTGTGGTTGTAAGGTGGGATGCTGAAGGTAA
ACATTGGAGAACTGATGGCATCAGCAATGTATCCTACAAACCAAAAGAAAGACTTGTAACATTCAGCCTG
GACACCTTTGGCCCTGTTACCTTGATTCAAGATGCTCATATTAACATGCCGTACCAGTCATGGGAACTAA
GACCACTTGATGTAAATAAAGTACTTTTAACTGTGACTACAGTATTTACTGAGATTCAAATACAAATTAA
GGAAAACCTCTGCATGTTATCTTCAATCAAACTAAAAGACAAGAAACACATCTCTATTTTGGAAGGAACC
TGGATGACTCCTATTCCTTTCATTATTGCTTTGAAAGAAGCTGGACTGAATATCTTTCCTACTAGACACT
CTCATTTTTATGTTATTATAAACAATAAGGTTCCTTTGGTAGAAGTGAAAGCTTATCGACAGATGGCCCT
ACTAAGTTCTGCTTTTGCATTTGGTTGGAGCAAGTGGAACCTACTATGTAATTCTACAAAAGTCGTATTT
AAGGTGAGGGAACACCTTACTGAAGCATGTACTGAGAATCCTAATTGGGCCCTTTTAATGTTTAGTGGTG
ACAGAGCACAAAGACTGAAGATCAAGGAAGAGAGTGAGGCATTTTCTGAAGCACTTAAAGAAGAAACTGA
GTTTCATTCTACTTTATATCACATGGTGAAGGATTTTGCTTCTGAGGAAGCAATGGAGAAAGTCAGGAGT
TCCAACTGTCAGTTTGTCAACTCTGTGTGCCACATGCTGCTCTCTACCAGATTGCTCAGCTACTCCTAA

Translation (722 aa):
MGPKAKKSGSKKKKVTKAERLKLLQEEEERRLKEEEEARLKYEKEEMERLEIQRIEKEKWHRLEAKDLER
RNEELEELYLLERCFPEAEKLKQETKLLSQWKHYIQCDGSPDPSVAQEMNTFISLWKEKTNETFEEVIEK
SKVVLNLIEKLKFILLETPPCDLQDKNIIQYQESILQLQELLHLKFGVATEILLKQASTLADLDSGNMEK
VIKDENVTLYVWANLKKNPRHRSVRFSETQIGFEIPRILATSDIAVRLLHTHYDHVSALHPVSTPSKEYT
SAVTELVKDDVKNVEKAISKEVEEESKQQERGSHLIQEEEIKVEEEQGDIEVKMSSAEEESEAIKCEREM
KVLSETVSAAQLLLVENSSEKPDFFEDNVVDLCQFTTLGGVYHLDILELPPQCKPVKGWMIVEILKEGLQ
KYTYPPETTEEFETENAFPPIEVTLEVHENVIFFEDPVVVRWDAEGKHWRTDGISNVSYKPKERLVTFSL
DTFGPVTLIQDAHINMPYQSWELRPLDVNKVLLTVTTVFTEIQIQIKENLCMLSSIKLKDKKHISILEGT
WMTPIPFIIALKEAGLNIFPTRHSHFYVIINNKVPLVEVKAYRQMALLSSAFAFGWSKWNLLCNSTKVVF
KVREHLTEACTENPNWALLMFSGDRAQRLKIKEESEAFSEALKEETEFHSTLYHMVKDFASEEAMEKVRS
SNCQFVNSVCHMLLSTRLLSYS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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