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Report for CCDS31862.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31862.1 Public Homo sapiens 12 OSBPL8 24 110 108 CCDS HistoryNCBI Gene:114882Re-query CCDS DB by CCDS ID:31862.1Re-query CCDS DB by GeneID:114882See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31862.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261183.8 ENSP00000261183.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261183.8Link to Ensembl Protein Viewer:ENSP00000261183.3Re-query CCDS DB by Nucleotide ID:ENST00000261183Re-query CCDS DB by Protein ID:ENSP00000261183
Original member Current member NCBI NM_020841.5 NP_065892.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020841.5Link to Protein Sequence:NP_065892.1Re-query CCDS DB by Nucleotide ID:NM_020841Re-query CCDS DB by Protein ID:NP_065892Link to BLAST:NP_065892.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065892.1 889 Q9BZF1-1 889 100% 0 0

Chromosomal Locations for CCDS 31862.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 76355889 76356021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76356626 76356728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76358706 76358811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76369214 76369301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76369637 76369822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76371448 76371584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76373344 76373433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76375273 76375370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76378452 76378550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76384254 76384350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76386168 76386266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76386579 76386660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76389645 76389829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76390420 76390657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76392581 76392752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76394645 76394729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76397694 76397897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76399873 76399974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76402689 76402766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76410564 76410634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76450851 76450988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76459859 76459895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 76487510 76487551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2670 nt):
ATGGAGGGAGGTTTGGCAGATGGAGAACCTGATCGAACTTCGCTTCTTGGTGATAGCAAAGATGTCCTTG
GGCCATCAACTGTTGTAGCAAACAGTGACGAATCTCAGCTTCTGACACCAGGAAAGATGAGTCAGCGCCA
AGGAAAAGAAGCTTATCCAACGCCAACCAAAGATTTGCATCAGCCATCTCTTAGTCCAGCAAGTCCTCAT
AGCCAGGGTTTTGAAAGAGGGAAGGAAGATATTTCTCAAAATAAAGATGAATCTTCACTTTCTATGTCAA
AGAGCAAGTCTGAATCTAAACTTTATAATGGCTCAGAGAAGGACAGTTCAACTTCAAGCAAACTCACAAA
AAAAGAATCTCTTAAGGTACAAAAGAAAAATTACCGAGAAGAAAAGAAAAGAGCCACAAAGGAGCTGCTC
AGTACAATCACAGATCCTTCTGTTATTGTTATGGCTGATTGGTTAAAGATTCGTGGTACTCTAAAGAGCT
GGACCAAGTTATGGTGTGTGTTGAAACCTGGGGTGCTACTGATCTATAAAACCCAAAAAAATGGTCAGTG
GGTAGGAACAGTTCTTCTGAATGCCTGTGAAATCATTGAACGTCCATCAAAAAAGGATGGCTTTTGTTTC
AAACTTTTCCATCCTTTGGAGCAATCTATTTGGGCAGTGAAGGGTCCAAAAGGTGAAGCGGTTGGATCCA
TTACTCAACCCTTACCTAGCAGTTATTTGATCATCCGAGCTACTTCAGAGTCAGATGGAAGGTGCTGGAT
GGATGCTTTGGAGTTGGCTTTGAAATGTTCTAGTCTTCTTAAACGTACAATGATCAGAGAAGGAAAGGAA
CATGACCTGAGCGTTTCATCAGATAGCACACATGTGACTTTCTATGGCTTACTACGTGCTAACAATCTCC
ACAGTGGTGATAACTTCCAGTTAAATGATAGTGAAATTGAACGACAACATTTTAAGGACCAAGATATGTA
TTCTGATAAATCTGATAAAGAAAATGATCAAGAACATGATGAGTCTGATAATGAGGTGATGGGGAAAAGT
GAAGAAAGTGACACAGATACATCAGAAAGACAAGATGACTCATATATCGAACCTGAGCCTGTTGAGCCTT
TAAAGGAGACTACCTACACTGAACAGAGCCATGAAGAACTTGGAGAGGCAGGTGAGGCTTCTCAAACAGA
AACTGTATCTGAAGAAAACAAAAGCCTTATCTGGACACTATTGAAACAAGTCCGTCCTGGCATGGACCTA
TCCAAGGTGGTTCTGCCTACATTTATTTTGGAACCCCGTTCTTTCCTGGATAAACTTTCAGATTACTACT
ATCATGCAGATTTCCTATCTGAGGCAGCTCTTGAAGAAAATCCTTATTTCCGTTTGAAGAAAGTAGTGAA
ATGGTATTTGTCAGGATTCTATAAAAAGCCAAAGGGACTGAAGAAACCTTATAATCCTATACTTGGCGAG
ACTTTCCGTTGTTTATGGATTCATCCCAGAACAAACAGCAAAACTTTTTATATTGCTGAACAGGTGTCCC
ATCATCCACCAATATCTGCCTTTTATGTTAGTAATCGAAAAGATGGATTTTGCCTTAGCGGTAGTATCCT
GGCTAAGTCTAAGTTTTATGGAAACTCATTATCTGCAATATTAGAGGGAGAAGCACGGTTAACTTTCTTG
AATAGAGGTGAAGATTATGTAATGACAATGCCATACGCTCATTGTAAAGGAATTCTTTATGGTACAATGA
CACTGGAGCTTGGTGGAACAGTCAATATTACATGTCAAAAAACTGGATACAGTGCAATACTTGAATTTAA
ACTAAAGCCATTCCTAGGGAGTAGTGACTGTGTTAATCAAATATCAGGGAAACTTAAACTGGGAAAAGAA
GTCCTAGCTACTTTGGAAGGTCATTGGGATAGTGAAGTTTTTATTACTGATAAAAAGACTGATAATTCAG
AGGTTTTCTGGAATCCAACACCTGACATTAAGCAATGGAGATTAATAAGGCACACTGTAAAATTTGAAGA
ACAGGGAGATTTTGAATCAGAGAAACTCTGGCAACGGGTAACTCGAGCCATAAATGCCAAAGACCAAACT
GAAGCTACCCAAGAGAAGTATGTTTTGGAAGAAGCTCAAAGACAAGCTGCCAGGGATCGGAAAACAAAAA
ATGAAGAGTGGTCTTGCAAATTATTTGAACTTGATCCACTCACAGGAGAATGGCATTACAAGTTTGCAGA
TACCCGACCATGGGACCCACTTAATGATATGATACAGTTTGAAAAAGATGGTGTTATTCAGACCAAAGTG
AAACATCGTACTCCAATGGTTAGCGTCCCCAAAATGAAACATAAGCCAACCAGGCAACAGAAGAAAGTAG
CAAAAGGCTATTCCTCCCCAGAACCTGACATTCAAGACTCCTCTGGAAGTGAAGCTCAATCAGTAAAACC
AAGTACAAGAAGAAAGAAAGGAATAGAACTGGGAGACATTCAGAGTTCCATCGAATCTATAAAACAAACA
CAGGAAGAAATTAAAAGAAATATTATGGCTCTTCGAAATCATTTAGTTTCAAGCACACCGGCCACGGATT
ATTTTCTGCAACAAAAAGACTACTTCATCATTTTCCTCCTGATTTTGCTTCAAGTCATAATAAACTTCAT
GTTCAAGTAG

Translation (889 aa):
MEGGLADGEPDRTSLLGDSKDVLGPSTVVANSDESQLLTPGKMSQRQGKEAYPTPTKDLHQPSLSPASPH
SQGFERGKEDISQNKDESSLSMSKSKSESKLYNGSEKDSSTSSKLTKKESLKVQKKNYREEKKRATKELL
STITDPSVIVMADWLKIRGTLKSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACEIIERPSKKDGFCF
KLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKCSSLLKRTMIREGKE
HDLSVSSDSTHVTFYGLLRANNLHSGDNFQLNDSEIERQHFKDQDMYSDKSDKENDQEHDESDNEVMGKS
EESDTDTSERQDDSYIEPEPVEPLKETTYTEQSHEELGEAGEASQTETVSEENKSLIWTLLKQVRPGMDL
SKVVLPTFILEPRSFLDKLSDYYYHADFLSEAALEENPYFRLKKVVKWYLSGFYKKPKGLKKPYNPILGE
TFRCLWIHPRTNSKTFYIAEQVSHHPPISAFYVSNRKDGFCLSGSILAKSKFYGNSLSAILEGEARLTFL
NRGEDYVMTMPYAHCKGILYGTMTLELGGTVNITCQKTGYSAILEFKLKPFLGSSDCVNQISGKLKLGKE
VLATLEGHWDSEVFITDKKTDNSEVFWNPTPDIKQWRLIRHTVKFEEQGDFESEKLWQRVTRAINAKDQT
EATQEKYVLEEAQRQAARDRKTKNEEWSCKLFELDPLTGEWHYKFADTRPWDPLNDMIQFEKDGVIQTKV
KHRTPMVSVPKMKHKPTRQQKKVAKGYSSPEPDIQDSSGSEAQSVKPSTRRKKGIELGDIQSSIESIKQT
QEEIKRNIMALRNHLVSSTPATDYFLQQKDYFIIFLLILLQVIINFMFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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