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Report for CCDS31883.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31883.1 Public Homo sapiens 12 BLTP3B 24 110 108 CCDS HistoryNCBI Gene:23074Re-query CCDS DB by CCDS ID:31883.1Re-query CCDS DB by GeneID:23074See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31883.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356828.7 ENSP00000349285.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356828.7Link to Ensembl Protein Viewer:ENSP00000349285.3Re-query CCDS DB by Nucleotide ID:ENST00000356828Re-query CCDS DB by Protein ID:ENSP00000349285
Original member Current member NCBI NM_001006947.2 NP_001006948.1 Accepted alive Link to Nucleotide Sequence:NM_001006947.2Link to Protein Sequence:NP_001006948.1Re-query CCDS DB by Nucleotide ID:NM_001006947Re-query CCDS DB by Protein ID:NP_001006948Link to BLAST:NP_001006948.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001006948.1 522 A0JNW5-2 522 100% 0 0

Chromosomal Locations for CCDS 31883.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 100070150 100070169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100072672 100072813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100083016 100083134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100084476 100084658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100086275 100086358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100088915 100089095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100095667 100095837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100097365 100097505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100098352 100098541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100102766 100102857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100103913 100103951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100108386 100108548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 100142592 100142635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1569 nt):
ATGGCCGGGATCATCAAGAAACAAATCTTGAAGCACCTCTCCAGATTTACCAAAAATTTATCTCCTGACA
AGATAAATCTAAGTACCCTTAAAGGAGAAGGTGAACTGAAGAATTTGGAGTTGGATGAAGAAGTACTCCA
GAATATGTTGGATTTGCCAACATGGCTTGCTATCAACAAAGTTTTTTGTAATAAAGCGTCCATTAGGATC
CCATGGACAAAACTGAAAACACATCCCATCTGTTTGTCCCTGGATAAAGTAATAATGGAAATGAGTACAT
GTGAAGAACCAAGAAGCCCTAATGGCCCATCACCAATTGCAACTGCTTCAGGACAAAGTGAATACGGCTT
TGCTGAAAAAGTAGTTGAGGGAATTTCTGTTTCTGTAAATTCTATAGTCATCAGAATTGGAGCAAAAGCC
TTCAATGCATCATTTGAACTTTCTCAGCTTCGGATCTATAGTGTAAATGCACACTGGGAACATGGAGATT
TGAGATTTACTCGTATTCAGGATCCACAGAGAGGAGAGGTTTTGACTTTTAAAGAAATAAATTGGCAGAT
GATAAGAATAGAGGCAGATGCCACCCAAAGTTCACATCTTGAAATTATGTGTGCTCCTGTTCGATTAATA
ACCAACCAATCAAAAATCAGAGTCACACTTAAAAGAAGGTTAAAGGACTGCAATGTCATAGCAACAAAGT
TAGTTCTAATATTGGATGACTTATTATGGGTTTTGACTGATTCCCAGTTGAAAGCTATGGTACAATATGC
AAAGTCTCTTAGTGAAGCAATAGAAAAATCAACAGAACAAAGGAAGAGTATGGCTCCTGAACCTACACAG
AGCTCTACAGTAGTCGCATCTGCCCAGCAAGTGAAGACAACGCAAACTTCAAATGCTCCTGATGTAAATG
ATGCAATTGTGAAACTATTCAATGATTTTGATGTTAAGGAAACCTCCCATCATTTAGTGATTTCTCATCT
AGATCTACACATATGTGATGACATTCATGCTAAAGAAAAAGAGTCAAACAGACGTATTACTGGAGGGGCA
ATGCAACTCTCTTTTACACAGCTAACTATAGATTATTATCCTTATCATAAAGCAGGAGATAGTTGTAATC
ATTGGATGTATTTTAGTGATGCAACCAAAACAAAAAATGGATGGGCCAATGAGTTATTGCATGAATTTGA
GTGCAACGTTGAAATGCTTAAACAGGCTGTGAAGGATCATAATGTAGGTTCACCTCCTAAATCCCCAACA
CATGCCTCTCCCCAGCACACACAAACAGAGAAGGACTACCCTCTGAAAGGGACATGCAGAACACCTTCAG
TATTATCTCAACAATCAAAAGCTAAGCTAATGTCTAGTTCTGTTGTGGTTAGACTTGCAGATTTCAATAT
ATACCAGGTCTCTACAGCGGAACAATGTCGTTCTTCCCCCAAAAGCATGATTTGCTGCAATAAAAAATCC
CTATATCTTCCACAAGAAATGTCAGCTGTCTATATAGAATTCACAGAATATTACTATCCAGATGGAAAGG
ATTTTCCAACTGCCTTCCTAAGCAGATGA

Translation (522 aa):
MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGELKNLELDEEVLQNMLDLPTWLAINKVFCNKASIRI
PWTKLKTHPICLSLDKVIMEMSTCEEPRSPNGPSPIATASGQSEYGFAEKVVEGISVSVNSIVIRIGAKA
FNASFELSQLRIYSVNAHWEHGDLRFTRIQDPQRGEVLTFKEINWQMIRIEADATQSSHLEIMCAPVRLI
TNQSKIRVTLKRRLKDCNVIATKLVLILDDLLWVLTDSQLKAMVQYAKSLSEAIEKSTEQRKSMAPEPTQ
SSTVVASAQQVKTTQTSNAPDVNDAIVKLFNDFDVKETSHHLVISHLDLHICDDIHAKEKESNRRITGGA
MQLSFTQLTIDYYPYHKAGDSCNHWMYFSDATKTKNGWANELLHEFECNVEMLKQAVKDHNVGSPPKSPT
HASPQHTQTEKDYPLKGTCRTPSVLSQQSKAKLMSSSVVVRLADFNIYQVSTAEQCRSSPKSMICCNKKS
LYLPQEMSAVYIEFTEYYYPDGKDFPTAFLSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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