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Report for CCDS31899.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31899.1 Public Homo sapiens 12 FAM216A 24 110 108 CCDS HistoryNCBI Gene:29902Re-query CCDS DB by CCDS ID:31899.1Re-query CCDS DB by GeneID:29902See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31899.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377673.10 ENSP00000366901.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377673.10Link to Ensembl Protein Viewer:ENSP00000366901.5Re-query CCDS DB by Nucleotide ID:ENST00000377673Re-query CCDS DB by Protein ID:ENSP00000366901
Original member Current member NCBI NM_013300.3 NP_037432.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013300.3Link to Protein Sequence:NP_037432.2Re-query CCDS DB by Nucleotide ID:NM_013300Re-query CCDS DB by Protein ID:NP_037432Link to BLAST:NP_037432.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037432.2 273 Q8WUB2 273 100% 0 0

Chromosomal Locations for CCDS 31899.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 110468876 110469018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110473078 110473118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110485078 110485199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110486325 110486454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110486534 110486717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110487861 110487943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110490019 110490137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (822 nt):
ATGCTGGGACAGCTGCTCCCGCACACGGCTCGCGGTCTCGGCGCCGCGGAGATGCCCGGCCAGGGTCCGG
GGTCCGACTGGACGGAGCGTAGCTCTTCTGCAGAGCCGCCCGCTGTGGCCGGGACCGAGGGTGGCGGCGG
CGGATCAGCTGGATACTCTTGTTACCAGAATTCCAAAGGTTCTGATAGAATCAAAGATGGATACAAAGTG
AACTCACACATAGCTAAGCTGCAAGAGTTATGGAAAACTCCCCAAAATCAAACAATCCACCTCTCTAAAT
CAATGATGGAGGCGTCCTTTTTCAAGCATCCAGACCTCACCACAGGCCAGAAGCGTTACCTGTGCAGCAT
TGCTAAAATCTATAATGCAAACTATCTGAAGATGTTAATGAAGAGGCAGTACATGCACGTACTTCAGCAC
AGCTCACAAAAGCCAGGTGTCCTCACTCATCACAGAAGCCGCCTTAGCTCCCGTTACTCACAGAAACAGC
ATTACCCTTGCACTACATGGCGACATCAACTGGAGAGAGAGGACTCGGGGTCTTCTGATATCGCAGCTGC
ATCTGCACCTGAAATGCTCATACAGCATTCCCTTTGGCGGCCAGTGAGAAACAAAGAAGGGATAAAAACT
GGATATGCATCTAAAACAAGATGTAAGTCACTGAAGATTTTTAGAAGACCAAGGAAACTGTTCATGCAAA
CAGTTTCTTCAGATGATTCTGAATCACACATGAGTGAAGAAAAAAAGGAAGAAGATTTACTAAATAATTT
TATGCAATCAATGTCAATTGAAGAACAGGGAGAACATCTGATGTTAACTTGA

Translation (273 aa):
MLGQLLPHTARGLGAAEMPGQGPGSDWTERSSSAEPPAVAGTEGGGGGSAGYSCYQNSKGSDRIKDGYKV
NSHIAKLQELWKTPQNQTIHLSKSMMEASFFKHPDLTTGQKRYLCSIAKIYNANYLKMLMKRQYMHVLQH
SSQKPGVLTHHRSRLSSRYSQKQHYPCTTWRHQLEREDSGSSDIAAASAPEMLIQHSLWRPVRNKEGIKT
GYASKTRCKSLKIFRRPRKLFMQTVSSDDSESHMSEEKKEEDLLNNFMQSMSIEEQGEHLMLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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