NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS31922.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31922.1 Public Homo sapiens 12 HIP1R 24 110 108 CCDS HistoryNCBI Gene:9026Re-query CCDS DB by CCDS ID:31922.1Re-query CCDS DB by GeneID:9026See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31922.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253083.9 ENSP00000253083.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000253083.9Link to Ensembl Protein Viewer:ENSP00000253083.4Re-query CCDS DB by Nucleotide ID:ENST00000253083Re-query CCDS DB by Protein ID:ENSP00000253083
Original member Current member NCBI NM_003959.3 NP_003950.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003959.3Link to Protein Sequence:NP_003950.1Re-query CCDS DB by Nucleotide ID:NM_003959Re-query CCDS DB by Protein ID:NP_003950Link to BLAST:NP_003950.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003950.1 1068 O75146-1 1068 100% 0 0

Chromosomal Locations for CCDS 31922.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 122835551 122835643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122848031 122848094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122848466 122848608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122848796 122848852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122849875 122849955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122850835 122850911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122851236 122851297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122854043 122854183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122854905 122854962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122855053 122855128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122855265 122855405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122855551 122855612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122855831 122855903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122855980 122856163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122856256 122856344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122856432 122856548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122856625 122856726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122857021 122857215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122858102 122858249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122858349 122858435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122858838 122858945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122859061 122859197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122859426 122859536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122859772 122859830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122860047 122860077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122860148 122860210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122860423 122860523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122860679 122860784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122860916 122861039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122861131 122861192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122861308 122861514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 122861706 122861753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3207 nt):
ATGAACAGCATCAAGAACGTGCCGGCGCGGGTGCTGAGCCGCAGGCCGGGCCACAGCCTGGAGGCCGAGC
GCGAGCAGTTCGACAAGACCCAGGCCATCAGCATCAGCAAAGCCATCAACACCCAGGAGGCCCCCGTGAA
GGAGAAGCACGCCCGGCGCATCATTCTGGGCACACACCACGAGAAGGGGGCTTTCACCTTCTGGTCCTAC
GCCATTGGGCTGCCGCTGCCCAGCAGCTCCATTCTCAGCTGGAAGTTCTGCCACGTCCTCCACAAGGTCC
TTCGAGACGGGCACCCCAATGTGCTGCATGACTGCCAGCGGTACCGCAGCAACATCCGGGAGATTGGAGA
CCTGTGGGGACATTTGCATGACCGCTACGGACAGCTGGTGAATGTCTACACCAAGCTGCTGCTGACCAAG
ATCTCCTTCCACCTCAAGCATCCCCAGTTTCCCGCGGGCCTGGAGGTGACAGATGAGGTACTGGAGAAGG
CAGCTGGGACCGATGTCAACAACATCTTCCAGCTCACTGTGGAGATGTTTGATTACATGGATTGTGAGCT
GAAGCTTTCTGAATCAGTTTTCCGACAGCTCAACACGGCCATCGCCGTATCCCAGATGTCCTCAGGCCAG
TGCCGCCTGGCCCCCCTCATCCAGGTCATCCAGGACTGCAGCCACCTCTACCACTACACGGTCAAGCTCC
TGTTCAAGCTACACTCTTGTCTCCCTGCGGACACCCTGCAAGGCCACAGGGACCGGTTCCACGAGCAGTT
TCACAGCCTCAGGAACTTCTTCCGCAGAGCCTCCGACATGCTGTACTTCAAGCGGCTCATCCAGATCCCC
CGGCTGCCCGAGGGACCCCCTAACTTCCTGCGGGCCTCAGCCCTGGCTGAGCACATCAAGCCGGTGGTGG
TGATCCCCGAGGAGGCCCCGGAAGATGAGGAGCCGGAGAATCTCATTGAGATCAGCACAGGGCCCCCCGC
GGGGGAGCCAGTGGTGGTGGCTGACCTCTTCGATCAGACGTTTGGACCCCCCAATGGGTCTGTGAAGGAC
GACAGGGACCTCCAGATTGAGAGCTTGAAGAGAGAGGTGGAAATGCTCCGCTCTGAACTGGAGAAGATCA
AGCTGGAGGCCCAGCGGTACATCGCGCAGCTGAAGAGCCAGGTGAATGCACTGGAGGGTGAGCTGGAGGA
GCAGCGGAAGCAGAAGCAGAAGGCCCTGGTGGATAATGAGCAGCTCCGCCACGAGCTGGCCCAGCTGAGG
GCTGCCCAGCTGGAGGGCGAGCGGAGCCAGGGCCTGCGTGAGGAGGCTGAGAGGAAGGCCAGTGCCACGG
AGGCGCGCTACAACAAGCTGAAGGAAAAGCACAGTGAGCTCGTCCATGTGCACGCGGAGCTGCTCAGAAA
GAACGCGGACACAGCCAAGCAGCTGACGGTGACGCAGCAAAGCCAGGAGGAGGTGGCGCGGGTGAAGGAG
CAGCTGGCCTTCCAGGTGGAGCAGGTGAAGCGGGAGTCGGAGTTGAAGCTAGAGGAGAAGAGCGACCAGC
TGGAGAAGCTCAAGAGGGAGCTGGAGGCCAAGGCCGGAGAGCTGGCCCGCGCGCAGGAGGCCCTGAGCCA
CACAGAGCAGAGCAAGTCGGAGCTGAGCTCACGGCTGGACACGCTGAGTGCGGAGAAGGATGCTCTGAGT
GGAGCTGTGCGGCAGCGGGAGGCAGACCTGCTGGCGGCGCAGAGCCTGGTGCGCGAGACAGAGGCGGCGC
TGAGCCGGGAGCAGCAGCGCAGCTCCCAGGAGCAGGGCGAGTTGCAGGGCCGGCTGGCAGAGAGGGAGTC
TCAGGAGCAGGGGCTGCGGCAGAGGCTGCTGGACGAGCAGTTCGCAGTGTTGCGGGGCGCTGCTGCCGAG
GCCGCGGGCATCCTGCAGGATGCCGTGAGCAAGCTGGACGACCCCCTGCACCTGCGCTGTACCAGCTCCC
CAGACTACCTGGTGAGCAGGGCCCAGGAGGCCTTGGATGCCGTGAGCACCCTGGAGGAGGGCCACGCCCA
GTACCTGACCTCCTTGGCAGACGCCTCCGCCCTGGTGGCAGCTCTGACCCGCTTCTCCCACCTGGCTGCG
GATACCATCATCAATGGCGGTGCCACCTCGCACCTGGCTCCCACCGACCCTGCCGACCGCCTCATAGACA
CCTGCAGGGAGTGCGGGGCCCGGGCTCTGGAGCTCATGGGGCAGCTGCAGGACCAGCAGGCTCTGCGGCA
CATGCAGGCCAGCCTGGTGCGGACACCCCTGCAGGGCATCCTTCAGCTGGGCCAGGAACTGAAACCCAAG
AGCCTAGATGTGCGGCAGGAGGAGCTGGGGGCCGTGGTCGACAAGGAGATGGCGGCCACATCCGCAGCCA
TTGAAGATGCTGTGCGGAGGATTGAGGACATGATGAACCAGGCACGCCACGCCAGCTCGGGGGTGAAGCT
GGAGGTGAACGAGAGGATCCTCAACTCCTGCACAGACCTGATGAAGGCTATCCGGCTCCTGGTGACGACA
TCCACTAGCCTGCAGAAGGAGATCGTGGAGAGCGGCAGGGGGGCAGCCACGCAGCAGGAATTTTACGCCA
AGAACTCGCGCTGGACCGAAGGCCTCATCTCGGCCTCCAAGGCTGTGGGCTGGGGAGCCACACAGCTGGT
GGAGGCAGCTGACAAGGTGGTGCTTCACACGGGCAAGTATGAGGAGCTCATCGTCTGCTCCCACGAGATC
GCAGCCAGCACGGCCCAGCTGGTGGCGGCCTCCAAGGTGAAGGCCAACAAGCACAGCCCCCACCTGAGCC
GCCTGCAGGAATGTTCTCGCACAGTCAATGAGAGGGCTGCCAATGTGGTGGCCTCCACCAAGTCAGGCCA
GGAGCAGATTGAGGACAGAGACACCATGGATTTCTCCGGCCTGTCCCTCATCAAGCTGAAGAAGCAGGAG
ATGGAGACCCAGGTGCGTGTCCTGGAGCTGGAGAAGACGCTGGAGGCTGAACGCATGCGGCTGGGGGAGT
TGCGGAAGCAACACTACGTGCTGGCTGGGGCATCAGGCAGCCCTGGAGAGGAGGTGGCCATCCGGCCCAG
CACTGCCCCCCGAAGTGTAACCACCAAGAAACCACCCCTGGCCCAGAAGCCCAGCGTGGCCCCCAGACAG
GACCACCAGCTTGACAAAAAGGATGGCATCTACCCAGCTCAACTCGTGAACTACTAG

Translation (1068 aa):
MNSIKNVPARVLSRRPGHSLEAEREQFDKTQAISISKAINTQEAPVKEKHARRIILGTHHEKGAFTFWSY
AIGLPLPSSSILSWKFCHVLHKVLRDGHPNVLHDCQRYRSNIREIGDLWGHLHDRYGQLVNVYTKLLLTK
ISFHLKHPQFPAGLEVTDEVLEKAAGTDVNNIFQLTVEMFDYMDCELKLSESVFRQLNTAIAVSQMSSGQ
CRLAPLIQVIQDCSHLYHYTVKLLFKLHSCLPADTLQGHRDRFHEQFHSLRNFFRRASDMLYFKRLIQIP
RLPEGPPNFLRASALAEHIKPVVVIPEEAPEDEEPENLIEISTGPPAGEPVVVADLFDQTFGPPNGSVKD
DRDLQIESLKREVEMLRSELEKIKLEAQRYIAQLKSQVNALEGELEEQRKQKQKALVDNEQLRHELAQLR
AAQLEGERSQGLREEAERKASATEARYNKLKEKHSELVHVHAELLRKNADTAKQLTVTQQSQEEVARVKE
QLAFQVEQVKRESELKLEEKSDQLEKLKRELEAKAGELARAQEALSHTEQSKSELSSRLDTLSAEKDALS
GAVRQREADLLAAQSLVRETEAALSREQQRSSQEQGELQGRLAERESQEQGLRQRLLDEQFAVLRGAAAE
AAGILQDAVSKLDDPLHLRCTSSPDYLVSRAQEALDAVSTLEEGHAQYLTSLADASALVAALTRFSHLAA
DTIINGGATSHLAPTDPADRLIDTCRECGARALELMGQLQDQQALRHMQASLVRTPLQGILQLGQELKPK
SLDVRQEELGAVVDKEMAATSAAIEDAVRRIEDMMNQARHASSGVKLEVNERILNSCTDLMKAIRLLVTT
STSLQKEIVESGRGAATQQEFYAKNSRWTEGLISASKAVGWGATQLVEAADKVVLHTGKYEELIVCSHEI
AASTAQLVAASKVKANKHSPHLSRLQECSRTVNERAANVVASTKSGQEQIEDRDTMDFSGLSLIKLKKQE
METQVRVLELEKTLEAERMRLGELRKQHYVLAGASGSPGEEVAIRPSTAPRSVTTKKPPLAQKPSVAPRQ
DHQLDKKDGIYPAQLVNY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH